RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 ARHGAP36Q6ZRI8 547 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 MON1BQ7L1V2 547 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 ZNF761Q86XN6 746 aaPredicted RBP10.3□□□□□ -0.76
DDX39B-220ENST00000482195 NRROSQ86YC3 692 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
DDX39B-220ENST00000482195 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
DDX39B-220ENST00000482195 AGBL5Q8NDL9 886 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 GPBAR1Q8TDU6 330 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 NKD1Q969G9 470 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 AHCYL2Q96HN2 611 aaKnown RBP10.3□□□□□ -0.76
DDX39B-220ENST00000482195 CNPY3Q9BT09 278 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 SLC12A9Q9BXP2 914 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 ZNF71Q9NQZ8 489 aaPredicted RBP10.3□□□□□ -0.76
DDX39B-220ENST00000482195 KCNK4Q9NYG8 393 aa10.3□□□□□ -0.76
DDX39B-220ENST00000482195 SPTBN1Q01082 2364 aaKnown RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 HOXC4P09017 264 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CYP2A6P11509 494 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 PSMA2P25787 234 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 NFKBIAP25963 317 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CD1CP29017 333 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 VIPR1P32241 457 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CSF2RBP32927 897 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 HTR7P34969 479 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 UGT1A3P35503 534 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 TRIM23P36406 574 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 ETV3P41162 512 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CSNK1DP48730 415 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 RENBPP51606 427 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 LIMK2P53671 638 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 AP1S1P61966 158 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CDK3Q00526 305 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CTBSQ01459 385 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 TRA2AQ13595 282 aaKnown RBP eCLIP10.29□□□□□ -0.764e-34■■■□□ 17.2
DDX39B-220ENST00000482195 PEX6Q13608 980 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 KRT31Q15323 416 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CA9Q16790 459 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 AFMIDQ63HM1 303 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 MARK2Q7KZI7 788 aaKnown RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 ZNF438Q7Z4V0 828 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 OR4D9Q8NGE8 314 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 C9orf43Q8TAL5 461 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 FNIP1Q8TF40 1166 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 KIAA1143Q96AT1 154 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 ECHDC3Q96DC8 303 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 B3GNT4Q9C0J1 378 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 CDH19Q9H159 772 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 NUP62CLQ9H1M0 184 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 GPN2Q9H9Y4 310 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 OCIAD1Q9NX40 245 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 TMEM9Q9P0T7 183 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 PCSK1NQ9UHG2 260 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 SPTAN1Q13813 2472 aaKnown RBP10.29□□□□□ -0.76
DDX39B-220ENST00000482195 NBPF19A0A087WUL8 3843 aa10.29□□□□□ -0.76
DDX39B-220ENST00000482195 RELNP78509 3460 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 TRBV23OR9-2A0A075B6M9 112 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 IGHV1OR21-1A0A087WYE8 117 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 A8MU76 341 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 TMCO5BA8MYB1 307 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 TMEM229AB2RXF0 380 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 TRAFD1O14545 582 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 DUX1O43812 170 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 CEACAM5P06731 702 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 THRAP10827 490 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 ERCC2P18074 760 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 MAPK9P45984 424 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 NOP2P46087 812 aaKnown RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 GPR3P46089 330 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 POLD2P49005 469 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 UBAP2LQ14157 1087 aaKnown RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 RFTN1Q14699 578 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 LBRQ14739 615 aaKnown RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 NR1D2Q14995 579 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 IGFBP7Q16270 282 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 CLPPQ16740 277 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 DCAF12Q5T6F0 453 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 ANKS6Q68DC2 871 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 RFX8Q6ZV50 586 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 KDELC2Q7Z4H8 507 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 NAGSQ8N159 534 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 NPWQ8N729 165 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 DTD2Q96FN9 168 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 COQ10AQ96MF6 247 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 CATSPER2Q96P56 530 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 OR2M4Q96R27 311 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 SLC38A3Q99624 504 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 CTRCQ99895 268 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 AGPAT1Q99943 283 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 SNRNP25Q9BV90 132 aaKnown RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 DDA1Q9BW61 102 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 FRMD8Q9BZ67 464 aaPredicted RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 ASPSCR1Q9BZE9 553 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 ZNF358Q9NW07 568 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 TRNAU1APQ9NX07 287 aaKnown RBP10.28□□□□□ -0.76
DDX39B-220ENST00000482195 CD84Q9UIB8 345 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 PLEKHM1Q9Y4G2 1056 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 PCDHGC4Q9Y5F7 938 aa10.28□□□□□ -0.76
DDX39B-220ENST00000482195 PCDHGA3Q9Y5H0 932 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms