RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 PDPK2PQ6A1A2 396 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 ESRP1Q6NXG1 681 aaKnown RBP20.66■□□□□ 0.9
VPS16-207ENST00000481812 WDR93Q6P2C0 686 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 CASC4Q6P4E1 433 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 RELL1Q8IUW5 271 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 TMEFF1Q8IYR6 380 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 GPR26Q8NDV2 337 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 OR13C4Q8NGS5 318 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 CDKN2AIPNLQ96HQ2 116 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 SGSM3Q96HU1 749 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 HSPA12BQ96MM6 686 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 ORAI3Q9BRQ5 295 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 EBF2Q9HAK2 575 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 GON4LQ3T8J9 2241 aa20.66■□□□□ 0.9
VPS16-207ENST00000481812 TOR1BO14657 336 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 SLC31A1O15431 190 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 BUD23O43709 281 aaKnown RBP20.65■□□□□ 0.9
VPS16-207ENST00000481812 PGAM1P18669 254 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 MCM3P25205 808 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 ELK3P41970 407 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 TCF15Q12870 199 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 MTM1Q13496 603 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 SIM2Q14190 667 aaPredicted RBP20.65■□□□□ 0.9
VPS16-207ENST00000481812 WSCD2Q2TBF2 565 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 TMEM145Q8NBT3 493 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 PRSS33Q8NF86 280 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 OR13J1Q8NGT2 312 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 KLK6Q92876 244 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 AP2M1Q96CW1 435 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 DNAJC1Q96KC8 554 aaKnown RBP20.65■□□□□ 0.9
VPS16-207ENST00000481812 ZNF778Q96MU6 729 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 BPIFA1Q9NP55 256 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 NFU1Q9UMS0 254 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 MAD1L1Q9Y6D9 718 aa20.65■□□□□ 0.9
VPS16-207ENST00000481812 MEI4A8MW99 385 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 SLC4A1P02730 911 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 POLBP06746 335 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 TSHRP16473 764 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 DPP6P42658 865 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 XIAPP98170 497 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 ANKRD20A4Q4UJ75 823 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 KIAA0930Q6ICG6 404 aaPredicted RBP20.64■□□□□ 0.89
VPS16-207ENST00000481812 CCNI2Q6ZMN8 369 aaPredicted RBP20.64■□□□□ 0.89
VPS16-207ENST00000481812 RFLNAQ6ZTI6 216 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 TRAM1L1Q8N609 369 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 LOXL4Q96JB6 756 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 ZSCAN5AQ9BUG6 496 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 EPC1Q9H2F5 836 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 SAYSD1Q9NPB0 183 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 IL26Q9NPH9 171 aa20.64■□□□□ 0.89
VPS16-207ENST00000481812 GLYATL1P3A0A0U1RQE8 302 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 BANF1O75531 89 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 PAMP19021 973 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 NMBRP28336 390 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 TRIM23P36406 574 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 FRG1Q14331 258 aaKnown RBP20.63■□□□□ 0.89
VPS16-207ENST00000481812 PTPRCAPQ14761 206 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 SPANXN3Q5MJ09 141 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 LYSMD4Q5XG99 296 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 STEAP4Q687X5 459 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 IGDCC3Q8IVU1 814 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 ZBED8Q8IZ13 594 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 DEFB119Q8N690 84 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 FBXO36Q8NEA4 188 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 C1orf216Q8TAB5 229 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 PYROXD1Q8WU10 500 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 SCAMP4Q969E2 229 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 MFSD3Q96ES6 412 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 TBATAQ96M53 351 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 WDR83Q9BRX9 315 aaKnown RBP20.63■□□□□ 0.89
VPS16-207ENST00000481812 RIOK2Q9BVS4 552 aaKnown RBP20.63■□□□□ 0.89
VPS16-207ENST00000481812 SLC2A6Q9UGQ3 507 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 ZC3H7BQ9UGR2 993 aaKnown RBP20.63■□□□□ 0.89
VPS16-207ENST00000481812 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.63■□□□□ 0.89
VPS16-207ENST00000481812 EIF2B4Q9UI10 523 aaKnown RBP20.63■□□□□ 0.89
VPS16-207ENST00000481812 CD84Q9UIB8 345 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 FKBPLQ9UIM3 349 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 RPS6KL1Q9Y6S9 549 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 FAM169AQ9Y6X4 670 aa20.63■□□□□ 0.89
VPS16-207ENST00000481812 V9GYY5 206 aaPredicted RBP20.63■□□□□ 0.89
VPS16-207ENST00000481812 ZCWPW2A0A1B0GU75 182 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 AGAP14A8MT82 685 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 GAPDHSO14556 408 aaPredicted RBP20.62■□□□□ 0.89
VPS16-207ENST00000481812 FPGTO14772 594 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 RAD51BO15315 384 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 HOXC4P09017 264 aaPredicted RBP20.62■□□□□ 0.89
VPS16-207ENST00000481812 GSTA2P09210 222 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 HOXD12P35452 270 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 PTGER3P43115 390 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 MAGEA4P43358 317 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 RACK1P63244 317 aaKnown RBP20.62■□□□□ 0.89
VPS16-207ENST00000481812 PEX6Q13608 980 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 ITGA9Q13797 1035 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 SLMAPQ14BN4 828 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 IRF4Q15306 451 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 PNCKQ6P2M8 343 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 ABI3BPQ7Z7G0 1075 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 CCDC25Q86WR0 208 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 SNX19Q92543 992 aa20.62■□□□□ 0.89
VPS16-207ENST00000481812 HDAC10Q969S8 669 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms