RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 DEPDC7Q96QD5 511 aa16.96■□□□□ 0.31
HSPG2-209ENST00000480900 TRIB3Q96RU7 358 aa16.96■□□□□ 0.31
HSPG2-209ENST00000480900 MLPHQ9BV36 600 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-209ENST00000480900 CYP4F12Q9HCS2 524 aa16.96■□□□□ 0.31
HSPG2-209ENST00000480900 GOLGA6AQ9NYA3 693 aa16.96■□□□□ 0.31
HSPG2-209ENST00000480900 MOSPD1Q9UJG1 213 aa16.96■□□□□ 0.31
HSPG2-209ENST00000480900 C1orf232A0A0U1RR37 186 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 CLDN7O95471 211 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 PTPN3P26045 913 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 ADCY2Q08462 1091 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 RTP5Q14D33 572 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 LLGL1Q15334 1064 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 TAF8Q7Z7C8 310 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 ACRBPQ8NEB7 543 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 WDR48Q8TAF3 677 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 SCAMP4Q969E2 229 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 TEKT5Q96M29 485 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 LACRTQ9GZZ8 138 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 TMEM168Q9H0V1 697 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 GLOD4Q9HC38 313 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 CD84Q9UIB8 345 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 SLC17A4Q9Y2C5 497 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 DUSP10Q9Y6W6 482 aa16.95■□□□□ 0.3
HSPG2-209ENST00000480900 ADAMTS20P59510 1910 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 CCDC66A2RUB6 948 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 IVLP07476 585 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 NAP1L1P55209 391 aaKnown RBP16.94■□□□□ 0.3
HSPG2-209ENST00000480900 PERM1Q5SV97 790 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 B4GALNT4Q76KP1 1039 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 KIAA1328Q86T90 577 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 TXLNBQ8N3L3 684 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 OR6C4Q8NGE1 309 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 KIAA1524Q8TCG1 905 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 CCHCR1Q8TD31 782 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 GPBAR1Q8TDU6 330 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 QKIQ96PU8 341 aaKnown RBP eCLIP16.94■□□□□ 0.3
HSPG2-209ENST00000480900 VAT1Q99536 393 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
HSPG2-209ENST00000480900 TRNAU1APQ9NX07 287 aaKnown RBP16.94■□□□□ 0.3
HSPG2-209ENST00000480900 PKD2L2Q9NZM6 624 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 SIRPGQ9P1W8 387 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 GULP1Q9UBP9 304 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 EFR3BQ9Y2G0 817 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 PCDHA3Q9Y5H8 950 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 PTPRQQ9UMZ3 2332 aa16.94■□□□□ 0.3
HSPG2-209ENST00000480900 RGSL1A5PLK6 1076 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 HACD1B0YJ81 288 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 APOC4-APOC2K7ER74 178 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 CSO75390 466 aaKnown RBP16.93■□□□□ 0.3
HSPG2-209ENST00000480900 TCEA3O75764 348 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 APOC2P02655 101 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 CTNNA2P26232 953 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 PTPN7P35236 360 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 SPINT3P49223 89 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 CDK18Q07002 472 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 WASHC5Q12768 1159 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 ILF3Q12906 894 aaKnown RBP eCLIP16.93■□□□□ 0.3
HSPG2-209ENST00000480900 XRCC4Q13426 336 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 GALNT3Q14435 633 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 FAM182AQ5T1J6 154 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 OGFOD3Q6PK18 319 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 ZC3H18Q86VM9 953 aaKnown RBP16.93■□□□□ 0.3
HSPG2-209ENST00000480900 LRRC57Q8N9N7 239 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 FAM46DQ8NEK8 389 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 GPR156Q8NFN8 814 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 GRAMD1AQ96CP6 724 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 SCARF2Q96GP6 870 aaPredicted RBP16.93■□□□□ 0.3
HSPG2-209ENST00000480900 HIC2Q96JB3 615 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 CCDC3Q9BQI4 270 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 RIOK2Q9BVS4 552 aaKnown RBP16.93■□□□□ 0.3
HSPG2-209ENST00000480900 GSDMCQ9BYG8 508 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 SUFUQ9UMX1 484 aa16.93■□□□□ 0.3
HSPG2-209ENST00000480900 CELSR3Q9NYQ7 3312 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 GRID2IPA4D2P6 1211 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 NDST3O95803 873 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 MT-CYBP00156 380 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-209ENST00000480900 FUCA1P04066 466 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 CD68P34810 354 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-209ENST00000480900 GNPDA1P46926 289 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 PCSK7Q16549 785 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 HENMT1Q5T8I9 393 aaKnown RBP16.92■□□□□ 0.3
HSPG2-209ENST00000480900 RBM44Q6ZP01 1051 aaKnown RBP16.92■□□□□ 0.3
HSPG2-209ENST00000480900 LYSMD3Q7Z3D4 306 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 SPC24Q8NBT2 197 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 SPATA22Q8NHS9 363 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 CCL4L1Q8NHW4 92 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 HTR3CQ8WXA8 447 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 CCDC74AQ96AQ1 378 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 HAUS1Q96CS2 278 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 COX14Q96I36 57 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 AGAP2Q99490 1192 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 HEMGNQ9BXL5 484 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 MAGEE1Q9HCI5 957 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 FAM153AQ9UHL3 310 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 RAXQ9Y2V3 346 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 PCDHB1Q9Y5F3 818 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 AK5Q9Y6K8 562 aa16.92■□□□□ 0.3
HSPG2-209ENST00000480900 AHCTF1Q8WYP5 2266 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 GOLGA6L6A8MZA4 724 aa16.91■□□□□ 0.3
HSPG2-209ENST00000480900 NOBOXO60393 691 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms