RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CCDC112Q8NEF3 446 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 LPCAT1Q8NF37 534 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 LRRC45Q96CN5 670 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 SCARF2Q96GP6 870 aaPredicted RBP11.41□□□□□ -0.58
CCM2-213ENST00000480658 RBM41Q96IZ5 413 aaKnown RBP11.41□□□□□ -0.58
CCM2-213ENST00000480658 PPP1R2P1Q96PQ5 205 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 OR2M4Q96R27 311 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 ZSCAN5AQ9BUG6 496 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 PACSIN1Q9BY11 444 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 TMEM168Q9H0V1 697 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 LRRN3Q9H3W5 708 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.41□□□□□ -0.58
CCM2-213ENST00000480658 LRIT1Q9P2V4 623 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 PNMA8BQ9ULN7 279 aaPredicted RBP11.41□□□□□ -0.58
CCM2-213ENST00000480658 HEY1Q9Y5J3 304 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 DMXL2Q8TDJ6 3036 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 CFAP47Q6ZTR5 3102 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 LRP4O75096 1905 aa11.41□□□□□ -0.58
CCM2-213ENST00000480658 OR5K4A6NMS3 321 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 B4DGG1 531 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 PLD2O14939 933 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 HGSO14964 777 aaPredicted RBP11.4□□□□□ -0.58
CCM2-213ENST00000480658 TLX3O43711 291 aaPredicted RBP11.4□□□□□ -0.58
CCM2-213ENST00000480658 CPNE6O95741 557 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 HLA-DQB2P05538 268 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 CEACAM5P06731 702 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 JMJD7P0C870 316 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 CETN2P41208 172 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 GNPDA1P46926 289 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 CLDN6P56747 220 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 TAS2R40P59535 323 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 TRA2AQ13595 282 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCM2-213ENST00000480658 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 TFDP3Q5H9I0 405 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 PERM1Q5SV97 790 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 C11orf63Q6NUN7 778 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 C19orf48Q6RUI8 117 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 CRTC1Q6UUV9 634 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 Q6ZVL8 140 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 GPR155Q7Z3F1 870 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 ZNF438Q7Z4V0 828 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 RFX6Q8HWS3 928 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 PQLC3Q8N755 202 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 PLD5Q8N7P1 536 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 ARRDC2Q8TBH0 407 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 ZDHHC1Q8WTX9 485 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 TFB1MQ8WVM0 346 aaKnown RBP11.4□□□□□ -0.58
CCM2-213ENST00000480658 SH3KBP1Q96B97 665 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 ATXN7L3BQ96GX2 97 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 FCRL3Q96P31 734 aaPredicted RBP11.4□□□□□ -0.58
CCM2-213ENST00000480658 OLFM3Q96PB7 478 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 HERPUD2Q9BSE4 406 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 LGR4Q9BXB1 951 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 SLC25A51Q9H1U9 297 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 EPB41L1Q9H4G0 881 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 TRABDQ9H4I3 376 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 ZFYVE1Q9HBF4 777 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 MAGEE1Q9HCI5 957 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 ASCL3Q9NQ33 180 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 SPTLC3Q9NUV7 552 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 SEPT10Q9P0V9 454 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 NFKBIL1Q9UBC1 381 aaPredicted RBP11.4□□□□□ -0.58
CCM2-213ENST00000480658 ACSL6Q9UKU0 697 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 SUFUQ9UMX1 484 aa11.4□□□□□ -0.58
CCM2-213ENST00000480658 ADAMTS20P59510 1910 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 DOCK9Q9BZ29 2069 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 CDRT15L2A8MXV6 281 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 HACD1B0YJ81 288 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 NOBOXO60393 691 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 PPFIA2O75334 1257 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 LCA5LO95447 670 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 JCHAINP01591 159 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 CELA2BP08218 269 aaPredicted RBP11.39□□□□□ -0.59
CCM2-213ENST00000480658 PDHA1P08559 390 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 CTPS1P17812 591 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 CD86P42081 329 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 NOP2P46087 812 aaKnown RBP11.39□□□□□ -0.59
CCM2-213ENST00000480658 FASLGP48023 281 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 COPS2P61201 443 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 RHDQ02161 417 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 DSC2Q02487 901 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 PTSQ03393 145 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 TLE3Q04726 772 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 ATP13A4Q4VNC1 1196 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 RAB11FIP2Q7L804 512 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 SPRED1Q7Z699 444 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 TSPAN33Q86UF1 283 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 PIM3Q86V86 326 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 C17orf82Q86X59 251 aaPredicted RBP11.39□□□□□ -0.59
CCM2-213ENST00000480658 PHYKPLQ8IUZ5 450 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 SPACA3Q8IXA5 215 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 RCOR2Q8IZ40 523 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 FBXO39Q8N4B4 442 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 RNF214Q8ND24 703 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 RAPGEF5Q92565 580 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 P3H4Q92791 437 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 HAUS1Q96CS2 278 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 IMP4Q96G21 291 aaKnown RBP11.39□□□□□ -0.59
CCM2-213ENST00000480658 WBP1Q96G27 269 aa11.39□□□□□ -0.59
CCM2-213ENST00000480658 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms