RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 DPYSL3Q14195 570 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 C16orf72Q14CZ0 275 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 ATP13A4Q4VNC1 1196 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 RALGPS1Q5JS13 557 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 VASH2Q86V25 355 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 ZFAND4Q86XD8 727 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 SLITRK4Q8IW52 837 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 RCBTB1Q8NDN9 531 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 LPCAT1Q8NF37 534 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 ZNF564Q8TBZ8 553 aaPredicted RBP6.66□□□□□ -1.34
FN1-220ENST00000480024 LRRN4Q8WUT4 740 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 SNRNP27Q8WVK2 155 aaKnown RBP6.66□□□□□ -1.34
FN1-220ENST00000480024 PIH1D2Q8WWB5 315 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 SYN2Q92777 582 aaPredicted RBP6.66□□□□□ -1.34
FN1-220ENST00000480024 SCAMP4Q969E2 229 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 AP2M1Q96CW1 435 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 SCRN2Q96FV2 425 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 OR2M4Q96R27 311 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 CMKLR1Q99788 373 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 POLR1EQ9GZS1 481 aaKnown RBP6.66□□□□□ -1.34
FN1-220ENST00000480024 CDH19Q9H159 772 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 FOXJ2Q9P0K8 574 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 CTTNBP2NLQ9P2B4 639 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 RCOR3Q9P2K3 495 aaPredicted RBP6.66□□□□□ -1.34
FN1-220ENST00000480024 SLC17A4Q9Y2C5 497 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 SSUH2Q9Y2M2 353 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 TMEM98Q9Y2Y6 226 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 BZW2Q9Y6E2 419 aaKnown RBP6.66□□□□□ -1.34
FN1-220ENST00000480024 HECTD1Q9ULT8 2610 aa6.66□□□□□ -1.34
FN1-220ENST00000480024 PTPN13Q12923 2485 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 A0A0J9YYE9 177 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CAPN8A6NHC0 703 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 C9orf172C9J069 976 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 PYCARD-AS1I3L0S3 204 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 MYO1FO00160 1098 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 INPP4BO15327 924 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 NVLO15381 856 aaKnown RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 B4GAT1O43505 415 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 FZD6O60353 706 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CPNE6O95741 557 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 TRBC1P01850 177 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 GYPCP04921 128 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 HLA-DQB2P05538 268 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 IVLP07476 585 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 LIPCP11150 499 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CCL4P13236 92 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 IL4RP24394 825 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 MPSTP25325 297 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 TEAD1P28347 426 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CSF2RBP32927 897 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ADCY8P40145 1251 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 PPM1FP49593 454 aaPredicted RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 ARSEP51690 589 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ZBED6P86452 979 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 B4GALNT1Q00973 533 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 GBE1Q04446 702 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 DPTQ07507 201 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 HADHQ16836 314 aaKnown RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 ANKRD20A8PQ5CZ79 823 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CCDC122Q5T0U0 273 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ZFYVE27Q5T4F4 411 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 NKAIN2Q5VXU1 208 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 TIGD7Q6NT04 549 aaPredicted RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 ALKBH5Q6P6C2 394 aaKnown RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 USP53Q70EK8 1073 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ZNF438Q7Z4V0 828 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 TECPR1Q7Z6L1 1165 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 PIM3Q86V86 326 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ZNF761Q86XN6 746 aaPredicted RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 GALNT13Q8IUC8 556 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 NAGSQ8N159 534 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 NDUFAF2Q8N183 169 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 TEX26Q8N6G2 289 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 KCTD6Q8NC69 237 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 JPH3Q8WXH2 748 aaPredicted RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 USP7Q93009 1102 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 TMEM159Q96B96 161 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 WBP1Q96G27 269 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CCDC74BQ96LY2 380 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 AGAP2Q99490 1192 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ZNF670Q9BS34 389 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 RIOK2Q9BVS4 552 aaKnown RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 TDRD1Q9BXT4 1180 aaKnown RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 PACSIN1Q9BY11 444 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ABCG8Q9H221 673 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 RBM22Q9NW64 420 aaKnown RBP eCLIP6.65□□□□□ -1.345e-24■■■■■ 27.4
FN1-220ENST00000480024 TRNAU1APQ9NX07 287 aaKnown RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 KCTD5Q9NXV2 234 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 AKAP7Q9P0M2 348 aaPredicted RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 IFNKQ9P0W0 207 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ACSL6Q9UKU0 697 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CAPN11Q9UMQ6 739 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 CHKBQ9Y259 395 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 LUC7L2Q9Y383 392 aaKnown RBP6.65□□□□□ -1.34
FN1-220ENST00000480024 PRKAB1Q9Y478 270 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 PLEKHM1Q9Y4G2 1056 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 ST14Q9Y5Y6 855 aa6.65□□□□□ -1.34
FN1-220ENST00000480024 MAST4O15021 2626 aa6.64□□□□□ -1.35
FN1-220ENST00000480024 NBASA2RRP1 2371 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms