RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CCNYQ8ND76 341 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 OR7D4Q8NG98 312 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 PCDH19Q8TAB3 1148 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 USP33Q8TEY7 942 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 LZICQ8WZA0 190 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 N4BP2L2Q92802 583 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 HMCESQ96FZ2 354 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CELF6Q96J87 481 aaKnown RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 PBKQ96KB5 322 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CLUHP3Q96NS8 147 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 NAP1L3Q99457 506 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 NAPGQ99747 312 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 MCMBPQ9BTE3 642 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 MAGEB5Q9BZ81 275 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 OSBPL8Q9BZF1 889 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 BRD8Q9H0E9 1235 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CARD9Q9H257 536 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 LRRC19Q9H756 370 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 FBRSL1Q9HCM7 1045 aaKnown RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 PCDH12Q9NPG4 1184 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 THAP10Q9P2Z0 257 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 UBA2Q9UBT2 640 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 VPS51Q9UID3 782 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CLEC4EQ9ULY5 219 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 NEU3Q9UQ49 428 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ERVW-1Q9UQF0 538 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 HEY1Q9Y5J3 304 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 MRFAP1Q9Y605 127 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CHD5Q8TDI0 1954 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 A0A0D9SEW6 157 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 EDDM13A0A1B0GTR0 161 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 C3orf70A6NLC5 250 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 USP27XA6NNY8 438 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 HACD1B0YJ81 288 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 APOC4-APOC2K7ER74 178 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 MCF2LO15068 1137 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 MTSS1O43312 755 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 LAMTOR5O43504 91 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 MFSD11O43934 449 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 CEP104O60308 925 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 APOC2P02655 101 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 DCNP07585 359 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 CD3EP07766 207 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 PYGMP11217 842 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 KRT10P13645 584 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 HOXB2P14652 356 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 TCP1P17987 556 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 IL4RP24394 825 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 CCNCP24863 283 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ACVRL1P37023 503 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 GARSP41250 739 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 KIR2DL1P43626 348 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 MARCKSL1P49006 195 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 FNTAP49354 379 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 SERPINH1P50454 418 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 PAPOLAP51003 745 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 RENBPP51606 427 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 DGKEP52429 567 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 SNRPD1P62314 119 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 POU4F1Q01851 419 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 RAD51Q06609 339 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF33AQ06730 810 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 IL10RBQ08334 325 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 AP1B1Q10567 949 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 MAP4K2Q12851 820 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF235Q14590 738 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 PDK1Q15118 436 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 TAZQ16635 292 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 PRSS53Q2L4Q9 553 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 TM4SF20Q53R12 229 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 INO80DQ53TQ3 878 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 EMC10Q5UCC4 262 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 AFMIDQ63HM1 303 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 TLDC1Q6P9B6 456 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 BBS12Q6ZW61 710 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 SPEM1Q8N4L4 309 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 SH2D3CQ8N5H7 860 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ALLCQ8N6M5 410 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 PCDH20Q8N6Y1 951 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF655Q8N720 491 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 PLD5Q8N7P1 536 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 TXNDC5Q8NBS9 432 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 TFB1MQ8WVM0 346 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 CLDN23Q96B33 292 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 PPP1R14BQ96C90 147 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 HDAC11Q96DB2 347 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ALG14Q96F25 216 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 RSRC1Q96IZ7 334 aaKnown RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 LMLNQ96KR4 655 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 CCDC140Q96MF4 163 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF599Q96NL3 588 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 CINPQ9BW66 212 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 HEMGNQ9BXL5 484 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 ACE2Q9BYF1 805 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 FRMD8P1Q9BZ68 369 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 BRINP2Q9C0B6 783 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 SLC39A8Q9C0K1 460 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 DUSP15Q9H1R2 295 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-209ENST00000479532 EPHX3Q9H6B9 360 aa6.25□□□□□ -1.41
SF3B1-209ENST00000479532 RBM12Q9NTZ6 932 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms