RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SEMA6CQ9H3T2 930 aa17.33■□□□□ 0.36
ECHDC1-216ENST00000479525 DTLQ9NZJ0 730 aa17.33■□□□□ 0.36
ECHDC1-216ENST00000479525 RCOR3Q9P2K3 495 aaPredicted RBP17.33■□□□□ 0.36
ECHDC1-216ENST00000479525 HEY1Q9Y5J3 304 aa17.33■□□□□ 0.36
ECHDC1-216ENST00000479525 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.33■□□□□ 0.361e-7■■■■□ 23.8
ECHDC1-216ENST00000479525 A0A0J9YYE9 177 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 LRRD1A4D1F6 860 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 PLD2O14939 933 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 B4GAT1O43505 415 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 AKR1B10O60218 316 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 JCHAINP01591 159 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 TRBC1P01850 177 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 SLC4A1P02730 911 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 ATP1A1P05023 1023 aaKnown RBP17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 HOXC4P09017 264 aaPredicted RBP17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 PIRTP0C851 137 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 GLB1P16278 677 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 MPSTP25325 297 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 SLC5A2P31639 672 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 ADCY8P40145 1251 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 CD86P42081 329 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 DYNLT1P63172 113 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 MAP9Q49MG5 647 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 PHF19Q5T6S3 580 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 BROXQ5VW32 411 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 NKAIN2Q5VXU1 208 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 RCBTB1Q8NDN9 531 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 SLC35G2Q8TBE7 412 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 GPBAR1Q8TDU6 330 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 NUDT22Q9BRQ3 303 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 RIOK2Q9BVS4 552 aaKnown RBP17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 TDRD1Q9BXT4 1180 aaKnown RBP17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 SEPT10Q9P0V9 454 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 UVRAGQ9P2Y5 699 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 LOXL2Q9Y4K0 774 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 PCDHGA8Q9Y5G5 932 aa17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 OAS3Q9Y6K5 1087 aaKnown RBP17.32■□□□□ 0.36
ECHDC1-216ENST00000479525 ASMTLO95671 621 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 MMP2P08253 660 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 CCNCP24863 283 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 HNRNPH3P31942 346 aaKnown RBP17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 ACTR1BP42025 376 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 MAPK10P53779 464 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 TMPRSS3P57727 454 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 ACTR1AP61163 376 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 B4GALNT1Q00973 533 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 CLN3Q13286 438 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 ZNF648Q5T619 568 aaPredicted RBP17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 CCDC13Q8IYE1 715 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 NAGSQ8N159 534 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 ARL14Q8N4G2 192 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 SPOCK2Q92563 424 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 RNF25Q96BH1 459 aaPredicted RBP17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 FAF2Q96CS3 445 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 LIN37Q96GY3 246 aaPredicted RBP17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 RNF157Q96PX1 679 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 GSDMCQ9BYG8 508 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 PCDH9Q9HC56 1237 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 ABHD10Q9NUJ1 306 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 TFR2Q9UP52 801 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 PPIL1Q9Y3C6 166 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 SDK2Q58EX2 2172 aa17.31■□□□□ 0.36
ECHDC1-216ENST00000479525 A0A1W2PQ67 120 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 CAPN8A6NHC0 703 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 F5H423 210 aaPredicted RBP17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 ATXN7O15265 892 aaPredicted RBP17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 EML2O95834 649 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 KRT1P04264 644 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 TMEM253P0C7T8 217 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 JMJD7P0C870 316 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 STC1P52823 247 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 SKOR1P84550 965 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 AP1B1Q10567 949 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 ILF3Q12906 894 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■■□ 19.4
ECHDC1-216ENST00000479525 LY6DQ14210 128 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 C16orf72Q14CZ0 275 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 PDK2Q15119 407 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 TIGD7Q6NT04 549 aaPredicted RBP17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 PLD5Q8N7P1 536 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 CNTD1Q8N815 330 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 OR8K1Q8NGG5 319 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 WDR48Q8TAF3 677 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 JPH3Q8WXH2 748 aaPredicted RBP17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 PMEPA1Q969W9 287 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 IQCDQ96DY2 449 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 WDR24Q96S15 920 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 DNAJC7Q99615 494 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 SEMA4CQ9C0C4 833 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 GOLPH3Q9H4A6 298 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 APPL1Q9UKG1 709 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 KALRNO60229 2985 aa17.3■□□□□ 0.36
ECHDC1-216ENST00000479525 C1orf232A0A0U1RR37 186 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 RHPN2P1A8MT19 583 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 FADS2P1A8MWK0 482 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 PSMD11O00231 422 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 PDE2AO00408 941 aaPredicted RBP17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 KRT7P08729 469 aa17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 NOP2P46087 812 aaKnown RBP17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 PPM1FP49593 454 aaPredicted RBP17.29■□□□□ 0.36
ECHDC1-216ENST00000479525 PCSK7Q16549 785 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms