RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 TNIP1Q15025 636 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 TCTN1Q2MV58 587 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 USP41Q3LFD5 358 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 ZRANB3Q5FWF4 1079 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 TATDN1Q6P1N9 297 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 ALKBH5Q6P6C2 394 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 ERN2Q76MJ5 926 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 TAOK1Q7L7X3 1001 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 TSPAN33Q86UF1 283 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 SLC35F3Q8IY50 421 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 FAM47BQ8NA70 645 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 MCUQ8NE86 351 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 GJC3Q8NFK1 279 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 GRK7Q8WTQ7 553 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 LPGAT1Q92604 370 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 IGSF8Q969P0 613 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 ZC3HAV1LQ96H79 300 aaKnown RBP7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 ZNF830Q96NB3 372 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 SPAG5Q96R06 1193 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 SLC25A23Q9BV35 468 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 NUP85Q9BW27 656 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 ZNF341Q9BYN7 854 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 MMADHCQ9H3L0 296 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 SLC28A3Q9HAS3 691 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 TCAF1Q9Y4C2 921 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 ZNF644Q9H582 1327 aaPredicted RBP7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 CAMSAP2Q08AD1 1489 aa7.49□□□□□ -1.21
GAPVD1-217ENST00000479511 A0A0U1RQF3 1178 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 BTBD19C9JJ37 291 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 PSMD14O00487 310 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 WDR46O15213 610 aaKnown RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 CAMTA2O94983 1202 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 PENKP01210 267 aaPredicted RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 CD63P08962 238 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 ERCC2P18074 760 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 HOXA7P31268 230 aaPredicted RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 TAS2R40P59535 323 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 MRPS35P82673 323 aaKnown RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 HOXA4Q00056 320 aaPredicted RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 TFAP4Q01664 338 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 RALGDSQ12967 914 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 KLF10Q13118 480 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 TUBB2AQ13885 445 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 PGM5Q15124 567 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 KRTCAP3Q53RY4 240 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 RARS2Q5T160 578 aaKnown RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 C6orf163Q5TEZ5 329 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 CES5AQ6NT32 575 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 SLC29A4Q7RTT9 530 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 IQCHQ86VS3 1027 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 RASAL3Q86YV0 1011 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 C1QL4Q86Z23 238 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 UEVLDQ8IX04 471 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 POU5F2Q8N7G0 328 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 HUS1BQ8NHY5 278 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 FIBINQ8TAL6 211 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 PIGKQ92643 395 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 KRT35Q92764 455 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 CABS1Q96KC9 395 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 CCDC114Q96M63 670 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 TMEM47Q9BQJ4 181 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 TUBB2BQ9BVA1 445 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 FUT8Q9BYC5 575 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 ACTR5Q9H9F9 607 aaPredicted RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 DDX4Q9NQI0 724 aaKnown RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 WBP11Q9Y2W2 641 aaKnown RBP7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 A3GALT2U3KPV4 340 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 MBD5Q9P267 1494 aa7.48□□□□□ -1.21
GAPVD1-217ENST00000479511 ARHGEF37A1IGU5 675 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 OR6C76A6NM76 312 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 ATP2C2O75185 946 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 TMCC1O94876 653 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 C8AP07357 584 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 TSPY4P0CV99 314 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 TSPY10P0CW01 314 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 PCNAP12004 261 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 ACTN1P12814 892 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 ETFAP13804 333 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 CFPP27918 469 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 MPLP40238 635 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 CLCNKBP51801 687 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 SORDQ00796 357 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 COASYQ13057 564 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 ZNF273Q14593 569 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 C6orf141Q5SZD1 244 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 OTOAQ7RTW8 1153 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 LRRC56Q8IYG6 542 aaPredicted RBP7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 SPC24Q8NBT2 197 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 CAMKVQ8NCB2 501 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 PROKR1Q8TCW9 393 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 ACTRT2Q8TDY3 377 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 HDAC11Q96DB2 347 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 RRNAD1Q96FB5 475 aaKnown RBP7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 BBC3Q96PG8 261 aaPredicted RBP7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 MTMR10Q9NXD2 777 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 DDX43Q9NXZ2 648 aaKnown RBP7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 SLC8A2Q9UPR5 921 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms