RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 DOCK4Q8N1I0 1966 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 MTMR11A4FU01 709 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 DRGXA6NNA5 263 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 H3BSA7 217 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 CDC7O00311 574 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 NR5A2O00482 541 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 TLR5O60602 858 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 PRAMEF11O60813 436 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 SNRPB2P08579 225 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 TACR2P21452 398 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 FDXRP22570 491 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 DNAJB1P25685 340 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 KPNA2P52292 529 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 ACLYP53396 1101 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 FCGRTP55899 365 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 IL10RBQ08334 325 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 TRIM25Q14258 630 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 SQLEQ14534 574 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 NFE2Q16621 373 aaPredicted RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 TCTN1Q2MV58 587 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 KIF19Q2TAC6 998 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 LRRC49Q8IUZ0 686 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 MDGA1Q8NFP4 955 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 TSPAN17Q96FV3 270 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 POLR1EQ9GZS1 481 aaKnown RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 ASB1Q9Y576 335 aa10.79□□□□□ -0.68
VPS52-217ENST00000478934 ZFP37Q9Y6Q3 630 aaPredicted RBP10.79□□□□□ -0.68
VPS52-217ENST00000478934 VWA8A3KMH1 1905 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 CLGNO14967 610 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 TRIM24O15164 1050 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 SLC22A2O15244 555 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 PAPSS2O95340 614 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 ZNF26P17031 533 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 ZNF37AP17032 561 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 HOXD9P28356 352 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 GRIA3P42263 894 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 CDH15P55291 814 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 HERVK_113P63132 956 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 LSAMPQ13449 338 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 C6orf10Q5SRN2 563 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 HMBOX1Q6NT76 420 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 LINGO4Q6UY18 593 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 ARHGAP18Q8N392 663 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 OR4K2Q8NGD2 314 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 OR4L1Q8NH43 312 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 RMDN1Q96DB5 314 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 CCDC97Q96F63 343 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 CDKN2AIPNLQ96HQ2 116 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 TEX37Q96LM6 180 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 ERVK-6Q9BXR3 956 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 MAP10Q9P2G4 905 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 RNF11Q9Y3C5 154 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 PATJQ8NI35 1801 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 SAC3D1A6NKF1 404 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 PDLIM1O00151 329 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 NRP2O60462 931 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 SLC10A3P09131 477 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 FAM58BPP0C7Q3 252 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 GFAPP14136 432 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 ATF6P18850 670 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 CAPN3P20807 821 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 GPX3P22352 226 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 ADSLP30566 484 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 DIO3P55073 304 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 RFTN1Q14699 578 aaPredicted RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 TSNQ15631 228 aaKnown RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 UGT3A1Q6NUS8 523 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 ZFP1Q6P2D0 407 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 C16orf59Q7L2K0 433 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 DENND1CQ8IV53 801 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 PIANPQ8IYJ0 282 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 NCSTNQ92542 709 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 ASB9Q96DX5 294 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 ACOX2Q99424 681 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 PIF1Q9H611 641 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 CAAP1Q9H8G2 361 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 PDFQ9HBH1 243 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 TLR8Q9NR97 1041 aaKnown RBP10.78□□□□□ -0.68
VPS52-217ENST00000478934 CATSPERZQ9NTU4 200 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 MARCH5Q9NX47 278 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 AURKCQ9UQB9 309 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 SLC4A7Q9Y6M7 1214 aa10.78□□□□□ -0.68
VPS52-217ENST00000478934 IQCF5A8MTL0 148 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 CLASP2O75122 1294 aaKnown RBP10.77□□□□□ -0.68
VPS52-217ENST00000478934 RPP40O75818 363 aaKnown RBP10.77□□□□□ -0.68
VPS52-217ENST00000478934 MT-ND1P03886 318 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 PIM1P11309 404 aaPredicted RBP10.77□□□□□ -0.68
VPS52-217ENST00000478934 CALRP27797 417 aaKnown RBP10.77□□□□□ -0.68
VPS52-217ENST00000478934 EEF1DP29692 281 aaKnown RBP10.77□□□□□ -0.68
VPS52-217ENST00000478934 RPL5P46777 297 aaKnown RBP10.77□□□□□ -0.68
VPS52-217ENST00000478934 SLC11A1P49279 550 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 INHBCP55103 352 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 STX5Q13190 355 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 LAMB3Q13751 1172 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 FAM26DQ5JW98 314 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 FAM45BPQ6NSW5 357 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 IFNEQ86WN2 208 aa10.77□□□□□ -0.68
VPS52-217ENST00000478934 SLC22A9Q8IVM8 553 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms