RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ZNF776Q68DI1 518 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 ARHGAP17Q68EM7 881 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 MSANTD2Q6P1R3 559 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 MMAAQ8IVH4 418 aaKnown RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 DHX40Q8IX18 779 aaKnown RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 APCDD1Q8J025 514 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 AHI1Q8N157 1196 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 STK40Q8N2I9 435 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 SLC25A45Q8N413 288 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 ZNF808Q8N4W9 903 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 DCBLD1Q8N8Z6 715 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 ANKRD52Q8NB46 1076 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 UBA3Q8TBC4 463 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 WFIKKN2Q8TEU8 576 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 CLEC4CQ8WTT0 213 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 TFAP2BQ92481 460 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 FAM131CQ96AQ9 280 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 NXPE2Q96DL1 559 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 CLIP3Q96DZ5 547 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 TMA16Q96EY4 203 aaKnown RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 PAGE5Q96GU1 130 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 TMEM176AQ96HP8 235 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 HIC2Q96JB3 615 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 ACE2Q9BYF1 805 aaPredicted RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 UBXN6Q9BZV1 441 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 LRRC27Q9C0I9 530 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 CPNE5Q9HCH3 593 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 CISHQ9NSE2 258 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 XPO7Q9UIA9 1087 aaKnown RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 CDC42EP3Q9UKI2 254 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 SARDHQ9UL12 918 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 TRAF3IP3Q9Y228 551 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 HBS1LQ9Y450 684 aaKnown RBP4.72□□□□□ -1.65
CKS1B-207ENST00000477676 TRAF6Q9Y4K3 522 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 U3KQA8 63 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 ITIH6Q6UXX5 1313 aa4.72□□□□□ -1.65
CKS1B-207ENST00000477676 CSMD1Q96PZ7 3565 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 MYO9AB2RTY4 2548 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 TLR4O00206 839 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 O00370 1275 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 XPO1O14980 1071 aaKnown RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 MAPK13O15264 365 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 PDPK1O15530 556 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 KLF4O43474 513 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 ACSL4O60488 711 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 SDC3O75056 442 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 YEATS4O95619 227 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 DNTTP04053 509 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 POLR2EP19388 210 aaKnown RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 NR2F2P24468 414 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 HSD3B2P26439 372 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 APEX1P27695 318 aaKnown RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 SLC8A1P32418 973 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 PSMD8P48556 350 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 RGS7P49802 495 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 CCR5P51681 352 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 C21orf59P57076 290 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 TAS2R38P59533 333 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 KRTAP10-9P60411 292 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 CXADRP78310 365 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 PITX1P78337 314 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 CFHR1Q03591 330 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 LY6DQ14210 128 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 NFIL3Q16649 462 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 LONRF2Q1L5Z9 754 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 TBC1D25Q3MII6 688 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 CBWD6Q4V339 395 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 DCAF6Q58WW2 860 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 CBWD3Q5JTY5 395 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 CBWD5Q5RIA9 395 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 RNF187Q5TA31 235 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 PMF1Q6P1K2 205 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 Q6ZPA2 131 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 RSRC2Q7L4I2 434 aaKnown RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 ULK2Q8IYT8 1036 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 CFAP52Q8N1V2 620 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 LSM14AQ8ND56 463 aaKnown RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 OR52K2Q8NGK3 314 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 OR2T34Q8NGX1 318 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 PCDH19Q8TAB3 1148 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 FIBINQ8TAL6 211 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 GOLGA5Q8TBA6 731 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 SLC35F5Q8WV83 523 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 FGF11Q92914 225 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 GFM2Q969S9 779 aaKnown RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 SLC39A13Q96H72 371 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 SERAC1Q96JX3 654 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 RPL10LQ96L21 214 aaKnown RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 ZSCAN16Q9H4T2 348 aaPredicted RBP4.71□□□□□ -1.66
CKS1B-207ENST00000477676 MAGEF1Q9HAY2 307 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 TMEM8AQ9HCN3 771 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 ASCL3Q9NQ33 180 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 AASDHPPTQ9NRN7 309 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 UCKL1Q9NWZ5 548 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 SUN2Q9UH99 717 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 TSPAN16Q9UKR8 245 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 PLA2G4CQ9UP65 541 aa4.71□□□□□ -1.66
CKS1B-207ENST00000477676 ERVW-1Q9UQF0 538 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms