RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FNDC3AQ9Y2H6 1198 aaKnown RBP15.29■□□□□ 0.04
SEC13-215ENST00000477547 ADAMTS9Q9P2N4 1935 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 A0A1W2PPC4 97 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 BHMG1C9JSJ3 638 aaPredicted RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 STX7O15400 261 aaKnown RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 LDB2O43679 373 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 PPFIA2O75334 1257 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 PCCBP05166 539 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 ADRA1DP25100 572 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 CD27P26842 260 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 IGFALSP35858 605 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 NPY2RP49146 381 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 SPINT3P49223 89 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 DRG2P55039 364 aaKnown RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 PLTPP55058 493 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 ARL4CP56559 192 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 DCDC1P59894 354 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 CAV1Q03135 178 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 COL9A2Q14055 689 aaPredicted RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
SEC13-215ENST00000477547 AGERQ15109 404 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 BBS9Q3SYG4 887 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 ZDHHC24Q6UX98 284 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 RFLNAQ6ZTI6 216 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 ZNF765Q7L2R6 523 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 CYP2U1Q7Z449 544 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 PDIK1LQ8N165 341 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 MPP5Q8N3R9 675 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 ZCCHC9Q8N567 271 aaKnown RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 TP53I13Q8NBR0 393 aaPredicted RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 OR4K2Q8NGD2 314 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 OR13C4Q8NGS5 318 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 FBXO25Q8TCJ0 367 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 ASB12Q8WXK4 309 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 ART4Q93070 314 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 SERAC1Q96JX3 654 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 DNAJC1Q96KC8 554 aaKnown RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 PWWP2AQ96N64 755 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 SLC6A18Q96N87 628 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 EBF2Q9HAK2 575 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 BPIFA1Q9NP55 256 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 RAD18Q9NS91 495 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 IL17CQ9P0M4 197 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 NFKBIL1Q9UBC1 381 aaPredicted RBP15.28■□□□□ 0.04
SEC13-215ENST00000477547 RAB23Q9ULC3 237 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 KCTD3Q9Y597 815 aa15.28■□□□□ 0.04
SEC13-215ENST00000477547 CACNA1EQ15878 2313 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 SLC30A4O14863 429 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 RAD51BO15315 384 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 BANF1O75531 89 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 PAK4O96013 591 aaPredicted RBP15.27■□□□□ 0.04
SEC13-215ENST00000477547 BPIP17213 487 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 ITPKAP23677 461 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 MAOBP27338 520 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 SPAM1P38567 509 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 CREB5Q02930 508 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 DHX9Q08211 1270 aaKnown RBP15.27■□□□□ 0.04
SEC13-215ENST00000477547 LAMB3Q13751 1172 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 PTPRCAPQ14761 206 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 LRRC14Q15048 493 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 WSCD2Q2TBF2 565 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 PCID2Q5JVF3 399 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 FNBP1LQ5T0N5 605 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 RAET1GQ6H3X3 334 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 TECPR1Q7Z6L1 1165 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 RAVER1Q8IY67 606 aaKnown RBP15.27■□□□□ 0.04
SEC13-215ENST00000477547 NRSN1Q8IZ57 195 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 PTCD2Q8WV60 388 aaKnown RBP15.27■□□□□ 0.04
SEC13-215ENST00000477547 AP2M1Q96CW1 435 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 ORAI3Q9BRQ5 295 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 FAM129AQ9BZQ8 928 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 AASDHPPTQ9NRN7 309 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 KCTD5Q9NXV2 234 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 FKBPLQ9UIM3 349 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 CA5BQ9Y2D0 317 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 MAD1L1Q9Y6D9 718 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 SLCO1B1Q9Y6L6 691 aa15.27■□□□□ 0.04
SEC13-215ENST00000477547 RGSL1A5PLK6 1076 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 MROH6A6NGR9 719 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 SDR42E2A6NKP2 422 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 PRAMEF26H0Y7S4 382 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 CCL22O00626 93 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 TMPRSS15P98073 1019 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 MSS51Q4VC12 460 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 TSTD2Q5T7W7 516 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 HENMT1Q5T8I9 393 aaKnown RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 ESRP1Q6NXG1 681 aaKnown RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 FAM151BQ6UXP7 276 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 GCNT7Q6ZNI0 430 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 NLRP9Q7RTR0 991 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 PTAR1Q7Z6K3 402 aaPredicted RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 IFT20Q8IY31 132 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 AGGF1Q8N302 714 aaeCLIP15.26■□□□□ 0.03
SEC13-215ENST00000477547 CBARPQ8N350 705 aaPredicted RBP15.26■□□□□ 0.03
SEC13-215ENST00000477547 TMEM145Q8NBT3 493 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 GPR26Q8NDV2 337 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 NETO1Q8TDF5 533 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 STYXQ8WUJ0 223 aa15.26■□□□□ 0.03
SEC13-215ENST00000477547 IFT81Q8WYA0 676 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms