RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ARID3BQ8IVW6 561 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 C16orf71Q8IYS4 520 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 SLC4A11Q8NBS3 891 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 NEK11Q8NG66 645 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 LRRC59Q96AG4 307 aaKnown RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 ZNF830Q96NB3 372 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 MLPHQ9BV36 600 aaPredicted RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 CNOT10Q9H9A5 744 aaKnown RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 Q9N2J8 555 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 PAG1Q9NWQ8 432 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 GDE1Q9NZC3 331 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 FETUBQ9UGM5 382 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 DDX25Q9UHL0 483 aaKnown RBP4.25□□□□□ -1.73
VPS13D-207ENST00000476169 COG5Q9UP83 839 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 ZNF148Q9UQR1 794 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 CHKBQ9Y259 395 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 DTX4Q9Y2E6 619 aa4.25□□□□□ -1.73
VPS13D-207ENST00000476169 CECR2Q9BXF3 1484 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 UTYO14607 1347 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 EMSYQ7Z589 1322 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 LNP1A1A4G5 178 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 ANXA2P2A6NMY6 339 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 C1QTNF3-AMACRE9PGA6 284 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 UBE2Q2LH0YL09 131 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 SLC33A1O00400 549 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 RTN2O75298 545 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 BCAS2O75934 225 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 JTBO76095 146 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 DDAH2O95865 285 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 MT-CYBP00156 380 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 GBAP04062 536 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 PCNAP12004 261 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 VPREB1P12018 145 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 AKR1A1P14550 325 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 IDUAP35475 653 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 RARRES1P49788 294 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 LUMP51884 338 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 NME5P56597 212 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 STX1BP61266 288 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 RPE65Q16518 533 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 TMEM198Q66K66 360 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 PMS2CLQ68D20 193 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 MOXD1Q6UVY6 613 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 RABEPKQ7Z6M1 372 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 TBC1D26Q86UD7 250 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 DZIP1Q86YF9 867 aaKnown RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 UEVLDQ8IX04 471 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 FAM217AQ8IXS0 508 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 TMEM217Q8N7C4 229 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 EXD3Q8N9H8 876 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 NHLRC2Q8NBF2 726 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 RBM15BQ8NDT2 890 aaKnown RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 OR14L1PQ8NHC6 308 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 CFAP61Q8NHU2 1237 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 ST7LQ8TDW4 575 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 DENND1AQ8TEH3 1009 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 IP6K1Q92551 441 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 PDLIM5Q96HC4 596 aaKnown RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 ERO1AQ96HE7 468 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 TEFMQ96QE5 360 aaKnown RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 NUDCD1Q96RS6 583 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 ZNF347Q96SE7 839 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 CACNG6Q9BXT2 260 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 RTN4RQ9BZR6 473 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 DNAJC18Q9H819 358 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 OLAHQ9NV23 265 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 ANO10Q9NW15 660 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 MCM9Q9NXL9 1143 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 CWC15Q9P013 229 aaKnown RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 ACTR3BQ9P1U1 418 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 CRNNQ9UBG3 495 aaPredicted RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 HEY2Q9UBP5 337 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 SLC8A2Q9UPR5 921 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 EXO1Q9UQ84 846 aaKnown RBP4.24□□□□□ -1.73
VPS13D-207ENST00000476169 ATP6V0A2Q9Y487 856 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 IKBKGQ9Y6K9 419 aa4.24□□□□□ -1.73
VPS13D-207ENST00000476169 A0A1B0GVM2 712 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 RGSL1A5PLK6 1076 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 KDM4EB2RXH2 506 aaPredicted RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 POC1B-GALNT4F8VUJ3 575 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 PLOD2O00469 737 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 MGST3O14880 152 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 NARSO43776 548 aaKnown RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 ATP2C2O75185 946 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 CELF2O95319 508 aaKnown RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TYMPP19971 482 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 ACHEP22303 614 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 PTGER1P34995 402 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 PCGF2P35227 344 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 SOAT1P35610 550 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 CRKLP46109 303 aaKnown RBP4.23□□□□□ -1.73
VPS13D-207ENST00000476169 ARSEP51690 589 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 CLDN2P57739 230 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 YPEL5P62699 121 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 SORDQ00796 357 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 ZBTB16Q05516 673 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 GRIK3Q13003 919 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 TCTN1Q2MV58 587 aa4.23□□□□□ -1.73
VPS13D-207ENST00000476169 PROSER3Q2NL68 480 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms