RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZNF765Q7L2R6 523 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 NRSN1Q8IZ57 195 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 ZNF567Q8N184 647 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 IFI44Q8TCB0 444 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 TADA1Q96BN2 335 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 RIOK2Q9BVS4 552 aaKnown RBP23.95■■□□□ 1.42
CPNE1-223ENST00000475146 BOCQ9BWV1 1114 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 TSGA10Q9BZW7 698 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 C10orf88Q9H8K7 445 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 PKD2L2Q9NZM6 624 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 SIRPGQ9P1W8 387 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 ADGRG1Q9Y653 693 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 CAPN6Q9Y6Q1 641 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 TMEM8BA6NDV4 472 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 TJP3O95049 919 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 NDST3O95803 873 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 PYGLP06737 847 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 PIRTP0C851 137 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 RBL1P28749 1068 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 GUSBP11Q6P575 273 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 DOK6Q6PKX4 331 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 LVRNQ6Q4G3 990 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 EFL1Q7Z2Z2 1120 aaKnown RBP23.94■■□□□ 1.42
CPNE1-223ENST00000475146 LYSMD3Q7Z3D4 306 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 CDKL3Q8IVW4 592 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-223ENST00000475146 SLC35F3Q8IY50 421 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 SDR16C5Q8N3Y7 309 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 CCDC112Q8NEF3 446 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 ZCCHC14Q8WYQ9 949 aaKnown RBP23.94■■□□□ 1.42
CPNE1-223ENST00000475146 FAM118BQ9BPY3 351 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 FERMT1Q9BQL6 677 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 CARS2Q9HA77 564 aaKnown RBP23.94■■□□□ 1.42
CPNE1-223ENST00000475146 GULP1Q9UBP9 304 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 FAM153AQ9UHL3 310 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 RSPH14Q9UHP6 348 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 GPR34Q9UPC5 381 aa23.94■■□□□ 1.42
CPNE1-223ENST00000475146 ARHGAP6O43182 974 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 SOD1P00441 154 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 GP1BAP07359 652 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 TNNT3P45378 269 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-223ENST00000475146 SPINT3P49223 89 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 EIF3EP60228 445 aaKnown RBP23.93■■□□□ 1.42
CPNE1-223ENST00000475146 INSM1Q01101 510 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-223ENST00000475146 ADAMTSL4Q6UY14 1074 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 TAF8Q7Z7C8 310 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 AGAP2Q99490 1192 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 FRMD8Q9BZ67 464 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-223ENST00000475146 TMEM168Q9H0V1 697 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 ZFYVE1Q9HBF4 777 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 TRHDEQ9UKU6 1024 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 GUCA1BQ9UMX6 200 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 SHOC2Q9UQ13 582 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 CEP295Q9C0D2 2601 aa23.93■■□□□ 1.42
CPNE1-223ENST00000475146 CEACAM5P06731 702 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 GNPDA1P46926 289 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 WNT3AP56704 352 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 TRIM74Q86UV6 250 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 NLRP8Q86W28 1048 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 RAVER1Q8IY67 606 aaKnown RBP23.92■■□□□ 1.42
CPNE1-223ENST00000475146 RNF10Q8N5U6 811 aaKnown RBP23.92■■□□□ 1.42
CPNE1-223ENST00000475146 ARL10Q8N8L6 244 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 KYQ8NBH2 561 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 MAPK15Q8TD08 544 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 FCRL5Q96RD9 977 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 ABCG4Q9H172 646 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 CLCA2Q9UQC9 943 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 ZNF711Q9Y462 761 aa23.92■■□□□ 1.42
CPNE1-223ENST00000475146 MAP1BP46821 2468 aaKnown RBP23.92■■□□□ 1.42
CPNE1-223ENST00000475146 EME2A4GXA9 379 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-223ENST00000475146 INPP4BO15327 924 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 DDX3YO15523 660 aaKnown RBP23.91■■□□□ 1.42
CPNE1-223ENST00000475146 KRT86O43790 486 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 OPA1O60313 960 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 RBP3P10745 1247 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 POLD2P49005 469 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 TARDBPQ13148 414 aaKnown RBP eCLIP23.91■■□□□ 1.42
CPNE1-223ENST00000475146 DARS2Q6PI48 645 aaKnown RBP23.91■■□□□ 1.42
CPNE1-223ENST00000475146 KDELC1Q6UW63 502 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 KDF1Q8NAX2 398 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-223ENST00000475146 IPMKQ8NFU5 416 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 NAT6Q93015 286 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 HIC2Q96JB3 615 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 GPR63Q9BZJ6 419 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 FAM83DQ9H4H8 585 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 MAGEE1Q9HCI5 957 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 PADI4Q9UM07 663 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 SUFUQ9UMX1 484 aa23.91■■□□□ 1.42
CPNE1-223ENST00000475146 RGSL1A5PLK6 1076 aa23.9■■□□□ 1.42
CPNE1-223ENST00000475146 GOLGA6L9A6NEM1 432 aa23.9■■□□□ 1.42
CPNE1-223ENST00000475146 STK10O94804 968 aaKnown RBP23.9■■□□□ 1.42
CPNE1-223ENST00000475146 ITPRIPL1Q6GPH6 555 aa23.9■■□□□ 1.42
CPNE1-223ENST00000475146 FAM46DQ8NEK8 389 aa23.9■■□□□ 1.42
CPNE1-223ENST00000475146 CCL4L1Q8NHW4 92 aa23.9■■□□□ 1.42
CPNE1-223ENST00000475146 PTCD2Q8WV60 388 aaKnown RBP23.9■■□□□ 1.42
CPNE1-223ENST00000475146 OXNAD1Q96HP4 312 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-223ENST00000475146 SLC17A4Q9Y2C5 497 aa23.9■■□□□ 1.42
CPNE1-223ENST00000475146 TMEM98Q9Y2Y6 226 aa23.9■■□□□ 1.42
CPNE1-223ENST00000475146 TRABD2BA6NFA1 517 aa23.89■■□□□ 1.41
CPNE1-223ENST00000475146 KCNN4O15554 427 aa23.89■■□□□ 1.41
CPNE1-223ENST00000475146 MT-CO3P00414 261 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms