RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 FAM72AQ5TYM5 149 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 FAM72DQ6L9T8 149 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ESRP1Q6NXG1 681 aaKnown RBP18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 TAF2Q6P1X5 1199 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 FAM72BQ86X60 149 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 C8orf59Q8N0T1 100 aaPredicted RBP18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 NPWQ8N729 165 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 PIK3C3Q8NEB9 887 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 CAPSLQ8WWF8 208 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 FAM149B1Q96BN6 582 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 RNF145Q96MT1 663 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 FAM124BQ9H5Z6 455 aaPredicted RBP18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 FBXO8Q9NRD0 319 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ZNF229Q9UJW7 825 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 PDE10AQ9Y233 779 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 HUS1O60921 280 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 SCNN1AP37088 669 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 TKTL1P51854 596 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 ECT2LQ008S8 904 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 POU6F1Q14863 301 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 CARTPTQ16568 116 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 RBM20Q5T481 1227 aaKnown RBP18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 NAPEPLDQ6IQ20 393 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 PKN3Q6P5Z2 889 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 AGBL3Q8NEM8 1001 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 TRIM54Q9BYV2 358 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 HOXD1Q9GZZ0 328 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 MUC13Q9H3R2 512 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 PARVBQ9HBI1 364 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 USP22Q9UPT9 525 aa18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 OAS3Q9Y6K5 1087 aaKnown RBP18.58■□□□□ 0.57
ECHDC1-214ENST00000474289 A6NL46 340 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 UPK1AO00322 258 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 DEAF1O75398 565 aaPredicted RBP18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 STAU1O95793 577 aaKnown RBP18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 CPB1P15086 417 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 CXCL9Q07325 125 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 FOXM1Q08050 763 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 BST2Q10589 180 aaKnown RBP18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 LAMC2Q13753 1193 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 DAG1Q14118 895 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 GRB7Q14451 532 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 MEP1AQ16819 746 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 AKAP14Q86UN6 197 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 RAVER1Q8IY67 606 aaKnown RBP18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 CLEC4FQ8N1N0 589 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 CLIP4Q8N3C7 705 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 CHDHQ8NE62 594 aaPredicted RBP18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 FLAD1Q8NFF5 587 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 OR7A2PQ8NGA2 310 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 NDNFQ8TB73 568 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 BPIFB1Q8TDL5 484 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 BIRC7Q96CA5 298 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 DNAJC15Q9Y5T4 150 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 PMF1-BGLAPU3KQ54 211 aa18.58■□□□□ 0.56
ECHDC1-214ENST00000474289 NRCAMQ92823 1304 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 GAS2O43903 313 aaKnown RBP18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 KPNA6O60684 536 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 SUPT7LO94864 414 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 NADKO95544 446 aaPredicted RBP18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 SERPINB1P30740 379 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 BMPR1AP36894 532 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 NR4A2P43354 598 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 SPATS1Q496A3 300 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 C6orf141Q5SZD1 244 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 NBPF12Q5TAG4 269 aaPredicted RBP18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 IL31Q6EBC2 164 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 ZNF470Q6ECI4 717 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 DCP1BQ8IZD4 617 aaKnown RBP18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 GABPB2Q8TAK5 448 aaPredicted RBP18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 SLC2A6Q9UGQ3 507 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 DSEQ9UL01 958 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 PCDHB3Q9Y5E6 796 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 NUAK1O60285 661 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 GABARAPO95166 117 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 POU4F1Q01851 419 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 ADPRMQ3LIE5 342 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 FUT11Q495W5 492 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 AGAP9Q5VTM2 703 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 ARMC8Q8IUR7 673 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 TMBIM1Q969X1 311 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 TXNDC15Q96J42 360 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 TOR3AQ9H497 397 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 SLC52A3Q9NQ40 469 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 TRHDEQ9UKU6 1024 aa18.57■□□□□ 0.56
ECHDC1-214ENST00000474289 EVPLQ92817 2033 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 NDUFS2O75306 463 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 S100BP04271 92 aaPredicted RBP18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 ITIH1P19827 911 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 PCMT1P22061 227 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 HRH2P25021 359 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 ALDH4A1P30038 563 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 CLCN3P51790 818 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 GABARAPL2P60520 117 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 IGBP1P78318 339 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 ILF2Q12905 390 aaKnown RBP18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 SLC13A2Q13183 592 aa18.56■□□□□ 0.56
ECHDC1-214ENST00000474289 ACAP2Q15057 778 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms