RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 GPBAR1Q8TDU6 330 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 FGF11Q92914 225 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 TMEM74Q96NL1 305 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 PPP1R2P1Q96PQ5 205 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 GFM1Q96RP9 751 aaKnown RBP20.4■□□□□ 0.86
SNX13-206ENST00000474067 BAG1Q99933 345 aaPredicted RBP20.4■□□□□ 0.86
SNX13-206ENST00000474067 STRADBQ9C0K7 418 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 TMEM168Q9H0V1 697 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 FAM83DQ9H4H8 585 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 SYNDIG1Q9H7V2 258 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 POLR1BQ9H9Y6 1135 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 ZFYVE1Q9HBF4 777 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 MAGEE1Q9HCI5 957 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 APPL1Q9UKG1 709 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 TRHDEQ9UKU6 1024 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 HYOU1Q9Y4L1 999 aa20.4■□□□□ 0.86
SNX13-206ENST00000474067 hCG_1818297A0A087WSY0 165 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 A0A087WV48 116 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 USP12O75317 370 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 STK10O94804 968 aaKnown RBP20.39■□□□□ 0.85
SNX13-206ENST00000474067 CLDN7O95471 211 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 PRLP01236 227 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 CEACAM5P06731 702 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 RBMS1P29558 406 aaKnown RBP20.39■□□□□ 0.85
SNX13-206ENST00000474067 CDC25BP30305 580 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 GNPDA1P46926 289 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 LSSP48449 732 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 SPINT3P49223 89 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 VAV2P52735 878 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 ERVPABLB-1P60509 514 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 KIF5AQ12840 1032 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 PRKD1Q15139 912 aaPredicted RBP20.39■□□□□ 0.85
SNX13-206ENST00000474067 CLPPQ16740 277 aaPredicted RBP20.39■□□□□ 0.85
SNX13-206ENST00000474067 QPCTQ16769 361 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 CNTD1Q8N815 330 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 KYQ8NBH2 561 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 TEKT5Q96M29 485 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 OR2M4Q96R27 311 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 GLOD4Q9HC38 313 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 MRPL40Q9NQ50 206 aaKnown RBP20.39■□□□□ 0.85
SNX13-206ENST00000474067 THSD1Q9NS62 852 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.39■□□□□ 0.85
SNX13-206ENST00000474067 KLHL8Q9P2G9 620 aaPredicted RBP20.39■□□□□ 0.85
SNX13-206ENST00000474067 RAXQ9Y2V3 346 aa20.39■□□□□ 0.85
SNX13-206ENST00000474067 SOWAHDA6NJG2 315 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 GPR89AB7ZAQ6 455 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 APOC4-APOC2K7ER74 178 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 TAF4O00268 1085 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 DXOO77932 396 aaKnown RBP20.38■□□□□ 0.85
SNX13-206ENST00000474067 EPOP01588 193 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 APOC2P02655 101 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
SNX13-206ENST00000474067 GPR89BP0CG08 455 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 MYF5P13349 255 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 SLC2A4P14672 509 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 CTNNA1P35221 906 aaKnown RBP20.38■□□□□ 0.85
SNX13-206ENST00000474067 RWDD2BP57060 319 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 DCDC1P59894 354 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 TBC1D25Q3MII6 688 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 CERCAMQ5T4B2 595 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 ZDHHC20Q5W0Z9 365 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 IGF2-ASQ6U949 168 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 NPNTQ6UXI9 565 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 MARCH9Q86YJ5 346 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 GALNT13Q8IUC8 556 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 AVL9Q8NBF6 648 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 SNIP1Q8TAD8 396 aaKnown RBP20.38■□□□□ 0.85
SNX13-206ENST00000474067 CCDC74AQ96AQ1 378 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 TMEM159Q96B96 161 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 CCDC97Q96F63 343 aaPredicted RBP20.38■□□□□ 0.85
SNX13-206ENST00000474067 ZSCAN5AQ9BUG6 496 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 GPR63Q9BZJ6 419 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 TRABDQ9H4I3 376 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 STN1Q9H668 368 aaKnown RBP20.38■□□□□ 0.85
SNX13-206ENST00000474067 HACD3Q9P035 362 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 FAM153AQ9UHL3 310 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 CD84Q9UIB8 345 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 SUFUQ9UMX1 484 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 PCDHA3Q9Y5H8 950 aa20.38■□□□□ 0.85
SNX13-206ENST00000474067 B4DGG1 531 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 BRINP1O60477 761 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 TJP3O95049 919 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 ASMTLO95671 621 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 NDST3O95803 873 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 CELA2BP08218 269 aaPredicted RBP20.37■□□□□ 0.85
SNX13-206ENST00000474067 MMP2P08253 660 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 PTPN3P26045 913 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 ABCG1P45844 678 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 CLDN6P56747 220 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 GABREP78334 506 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 PERM1Q5SV97 790 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 ITPRIPL1Q6GPH6 555 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 BBS12Q6ZW61 710 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 ARL14Q8N4G2 192 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 UBL4BQ8N7F7 174 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 WDR36Q8NI36 951 aaKnown RBP20.37■□□□□ 0.85
SNX13-206ENST00000474067 ZDHHC1Q8WTX9 485 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 HTR3CQ8WXA8 447 aa20.37■□□□□ 0.85
SNX13-206ENST00000474067 SCARF2Q96GP6 870 aaPredicted RBP20.37■□□□□ 0.85
SNX13-206ENST00000474067 RIOK2Q9BVS4 552 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms