RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 ERAP2Q6P179 960 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 KIAA1324Q6UXG2 1013 aaKnown RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 USP30Q70CQ3 517 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 USP45Q70EL2 814 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 CENPUQ71F23 418 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 BMP8AQ7Z5Y6 402 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 TSPAN33Q86UF1 283 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 FAM124AQ86V42 546 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 CCDC25Q86WR0 208 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 GSPT2Q8IYD1 628 aaKnown RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 AGGF1Q8N302 714 aaeCLIP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 CBARPQ8N350 705 aaPredicted RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 OR14C36Q8NHC7 312 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 EPS8L3Q8TE67 593 aaKnown RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 RAB7BQ96AH8 199 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 EID2BQ96D98 161 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 ABHD17AQ96GS6 310 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 MCCC1Q96RQ3 725 aaPredicted RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 LYSMD1Q96S90 227 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 SRPK1Q96SB4 655 aaKnown RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 FMO2Q99518 471 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 EBNA1BP2Q99848 306 aaKnown RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 IER2Q9BTL4 223 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 IL22Q9GZX6 179 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 TSPYL1Q9H0U9 437 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 TRABDQ9H4I3 376 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 C12orf49Q9H741 205 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 ZFYVE1Q9HBF4 777 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 NPHS2Q9NP85 383 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 SAYSD1Q9NPB0 183 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 SPATA6Q9NWH7 488 aaPredicted RBP7.59□□□□□ -1.19
CCDC93-207ENST00000474006 SYBUQ9NX95 663 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 B4GALT6Q9UBX8 382 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 KCTD3Q9Y597 815 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 FADS3Q9Y5Q0 445 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 ARL5AQ9Y689 179 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 MAD1L1Q9Y6D9 718 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 MYO10Q9HD67 2058 aa7.59□□□□□ -1.19
CCDC93-207ENST00000474006 DOCK4Q8N1I0 1966 aa7.59□□□□□ -1.2
CCDC93-207ENST00000474006 F5P12259 2224 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 NUP205Q92621 2012 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3DA0A087WVF3 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3IA0A087WXS9 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3EA0A087X179 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3KA0A087X1G2 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 C1orf232A0A0U1RR37 186 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3FA6NER0 549 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 MROH6A6NGR9 719 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 NPIPB15A6NHN6 443 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 C2orf81A6NN90 581 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3LB9A6J9 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 E7ESA3 106 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 K7ESF4 209 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 NEMP1O14524 444 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 EIF3HO15372 352 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TSPAN6O43657 245 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 LDB2O43679 373 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 BUD23O43709 281 aaKnown RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 AP1G1O43747 822 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 PAPSS2O95340 614 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 CRTAMO95727 393 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3HP0C7X1 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 CYP2A6P11509 494 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 EDN3P14138 238 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 LPOP22079 712 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 LHCGRP22888 699 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 NFKBIAP25963 317 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 AVPR2P30518 371 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 VIPR1P32241 457 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 LIG3P49916 1009 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 CCR3P51677 355 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 ELP6Q0PNE2 266 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 LAMB3Q13751 1172 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 SEPT6Q14141 434 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 ARHGEF7Q14155 803 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 FASTKD3Q14CZ7 662 aaKnown RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 SKIDA1Q1XH10 827 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TTC31Q49AM3 519 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TMEM52BQ4KMG9 183 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TMEM31Q5JXX7 168 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3GQ6DHY5 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3CQ6IPX1 549 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 CASC4Q6P4E1 433 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 CES3Q6UWW8 571 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 LIPIQ6XZB0 460 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 CEP128Q6ZU80 1094 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 DPPA4Q7L190 304 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 NLRP9Q7RTR0 991 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TMC3Q7Z5M5 1100 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 KBTBD6Q86V97 674 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 RASSF3Q86WH2 238 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 C1orf210Q8IVY1 113 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 PALM2Q8IXS6 379 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 ZBED8Q8IZ13 594 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TBC1D3Q8IZP1 549 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TTC30BQ8N4P2 665 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 FBXL6Q8N531 539 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 TMEM105Q8N8V8 129 aa7.58□□□□□ -1.2
CCDC93-207ENST00000474006 DTWD2Q8NBA8 298 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms