RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 HTR7P34969 479 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 ACVRL1P37023 503 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 HSPA13P48723 471 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 PRAMEP78395 509 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 NRG1Q02297 640 aaPredicted RBP10.93□□□□□ -0.66
C9orf3-214ENST00000473778 PRKCQQ04759 706 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 GALNT3Q14435 633 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 MAPRE2Q15555 327 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 PFKFB4Q16877 469 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SAMD4BQ5PRF9 694 aaKnown RBP10.93□□□□□ -0.66
C9orf3-214ENST00000473778 GALNT7Q86SF2 657 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SERINC5Q86VE9 423 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SLC22A9Q8IVM8 553 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SLC15A3Q8IY34 581 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 TEX26Q8N6G2 289 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 DIS3LQ8TF46 1054 aaKnown RBP10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SUSD3Q96L08 255 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 C1orf74Q96LT6 269 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 SP110Q9HB58 689 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 BTRCQ9Y297 605 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 ANKRD36A6QL64 1941 aa10.93□□□□□ -0.66
C9orf3-214ENST00000473778 hCG_2014768A0A024R1R8 64 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 A0A0U1RQF3 1178 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ZNF623O75123 536 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 PRDX3P30048 256 aaKnown RBP10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ACADVLP49748 655 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 NR1H2P55055 460 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 DIO3P55073 304 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 NFKB2Q00653 900 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 CTBSQ01459 385 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TUSC3Q13454 348 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 FBXL22Q6P050 247 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 DHFR2Q86XF0 187 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ZNF280BQ86YH2 543 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 SPPL2CQ8IUH8 684 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TSPAN14Q8NG11 270 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TWIST2Q8WVJ9 160 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TSPAN17Q96FV3 270 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 SERPINB11Q96P15 392 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ATOH8Q96SQ7 321 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ADAM2Q99965 735 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 MUC3BQ9H195 1237 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 MID1IP1Q9NPA3 183 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TMEM248Q9NWD8 314 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 CMTM6Q9NX76 183 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ABCD2Q9UBJ2 740 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TLR6Q9Y2C9 796 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 CCDC162PA2VCL2 907 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ASPDHA6ND91 283 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 SAC3D1A6NKF1 404 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 H3BNH8 94 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 H6PDO95479 791 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 LINC00032P0C843 101 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 CDK4P11802 303 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 SOX11P35716 441 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 THPOP40225 353 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TSPY1Q01534 308 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 YWHAHQ04917 246 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-214ENST00000473778 EFEMP1Q12805 493 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 CBX3Q13185 183 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 IRF5Q13568 498 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 DSC3Q14574 896 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 KIF19Q2TAC6 998 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 RAP1GAP2Q684P5 730 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 HACD2Q6Y1H2 254 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ZNF354CQ86Y25 554 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 MIB1Q86YT6 1006 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 FIBCD1Q8N539 461 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 OR2T34Q8NGX1 318 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 OR2T3Q8NH03 318 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 BLOC1S5Q8TDH9 187 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 TRPC4APQ8TEL6 797 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 PPWD1Q96BP3 646 aaKnown RBP10.92□□□□□ -0.66
C9orf3-214ENST00000473778 OSBPL11Q9BXB4 747 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 ZYG11BQ9C0D3 744 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 CAAP1Q9H8G2 361 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 GMIPQ9P107 970 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 GALPQ9UBC7 116 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 POLG2Q9UHN1 485 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 Q9Y3F1 56 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 CHD5Q8TDI0 1954 aa10.92□□□□□ -0.66
C9orf3-214ENST00000473778 IGLV3-10A0A075B6K4 115 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 TMEM221A6NGB7 291 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 H0YJX3 145 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 AKAP10O43572 662 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 TPST1O60507 370 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 CLIC3O95833 236 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 SLC2A3P11169 496 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 RHOQP17081 205 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 CES1P23141 567 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 SLC6A2P23975 617 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ZFP36L2P47974 494 aaKnown RBP10.91□□□□□ -0.66
C9orf3-214ENST00000473778 TBX4P57082 545 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 ACVR1Q04771 509 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 MAP7Q14244 749 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 LPIN1Q14693 890 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 KANK2Q63ZY3 851 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 MSANTD2Q6P1R3 559 aa10.91□□□□□ -0.66
C9orf3-214ENST00000473778 BORAQ6PGQ7 559 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms