RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 LRRK2Q5S007 2527 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 NBASA2RRP1 2371 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 A6NCN8 305 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 DFFAO00273 331 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 STK17BO94768 372 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 MAP3K6O95382 1288 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 IVLP07476 585 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 KRT7P08729 469 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 KELP23276 732 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 VIPR1P32241 457 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 GPR3P46089 330 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 MC2RQ01718 297 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 ILF3Q12906 894 aaKnown RBP eCLIP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 TRA2AQ13595 282 aaKnown RBP eCLIP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 DPYSQ14117 519 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 GRM3Q14832 879 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 NCAPHQ15003 741 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 KRT31Q15323 416 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 PYCR3Q53H96 274 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 CFAP58Q5T655 872 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 TMEM164Q5U3C3 297 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 RFX8Q6ZV50 586 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 MARK2Q7KZI7 788 aaKnown RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 NRSN1Q8IZ57 195 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 NLGN4XQ8N0W4 816 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 SFRP1Q8N474 314 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 FAM26EQ8N5C1 309 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 MSANTD4Q8NCY6 345 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 NLGN4YQ8NFZ3 816 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 PIH1D2Q8WWB5 315 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 STARD8Q92502 1023 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 PSKH2Q96QS6 385 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 RUFY1Q96T51 708 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 CNPY3Q9BT09 278 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 ANP32EQ9BTT0 268 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 CINPQ9BW66 212 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 ABCG8Q9H221 673 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 DHX35Q9H5Z1 703 aaKnown RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 CATSPERBQ9H7T0 1116 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 GPN2Q9H9Y4 310 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 CWC15Q9P013 229 aaKnown RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 TBC1D29Q9UFV1 150 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 PCSK1NQ9UHG2 260 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 ANAPC2Q9UJX6 822 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 CNOT6Q9ULM6 557 aaKnown RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 TMEM184BQ9Y519 407 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-223ENST00000473345 KCNMB2Q9Y691 235 aa9.57□□□□□ -0.88
MCF2L-223ENST00000473345 EEF2KO00418 725 aaKnown RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 PES1O00541 588 aaKnown RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 FGF10O15520 208 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 DNAJC6O75061 913 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 SEMA7AO75326 666 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 DNAJB5O75953 348 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 IL1R2P27930 398 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 CSTF2P33240 577 aaKnown RBP eCLIP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 NSFP46459 744 aaKnown RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 FASLGP48023 281 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 GFERP55789 205 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 SH3BP2P78314 561 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 IL10RBQ08334 325 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 NSUN2Q08J23 767 aaKnown RBP eCLIP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 MAMLD1Q13495 774 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 LBRQ14739 615 aaKnown RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 CLPPQ16740 277 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 TPD52L1Q16890 204 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 C4orf17Q53FE4 359 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 DCAF12Q5T6F0 453 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 CDKAL1Q5VV42 579 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 TXNRD3NBQ6F5E7 133 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 RAET1GQ6H3X3 334 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 C16orf46Q6P387 395 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 DNAJC24Q6P3W2 148 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 RBM43Q6ZSC3 357 aaKnown RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 MCOLN2Q8IZK6 566 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 LRRN4Q8WUT4 740 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 COX14Q96I36 57 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 OR2M4Q96R27 311 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 MCCC1Q96RQ3 725 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 TBC1D10AQ9BXI6 508 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 AKIRIN1Q9H9L7 192 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 PHPT1Q9NRX4 125 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 DTLQ9NZJ0 730 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 SCHIP1Q9P0W5 487 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-223ENST00000473345 KLHL3Q9UH77 587 aa9.56□□□□□ -0.88
MCF2L-223ENST00000473345 GOLGA6CA6NDK9 693 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 GOLGA6BA6NDN3 693 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 ARHGAP42A6NI28 874 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 FADS2P1A8MWK0 482 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 INPP4BO15327 924 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 FZD6O60353 706 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 MAFKO60675 156 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 PGLSO95336 258 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 TIAF1O95411 115 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 CPP00450 1065 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 PRLP01236 227 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 NTRK1P04629 796 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 ATP1A1P05023 1023 aaKnown RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 GOLGA6DP0CG33 693 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 GNLYP22749 145 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 AMPD1P23109 780 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms