RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 HIPK4Q8NE63 616 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 MAGEC3Q8TD91 643 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 CCDC124Q96CT7 223 aaKnown RBP4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 CNDP1Q96KN2 507 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 GPR21Q99679 349 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 TCF25Q9BQ70 676 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 AARSD1Q9BTE6 412 aaKnown RBP4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 RC3H2Q9HBD1 1191 aaKnown RBP4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 TNFRSF12AQ9NP84 129 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 POLR3BQ9NW08 1133 aaPredicted RBP4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 GALPQ9UBC7 116 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 SSX2IPQ9Y2D8 614 aa4.86□□□□□ -1.63
TM4SF1-202ENST00000472441 ANKRD36A6QL64 1941 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 TRAV19A0A0A6YYK7 116 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ATP6AP2A0A1C7CYW4 349 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 IQCF5A8MTL0 148 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 VGLL3A8MV65 326 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 HIDE1A8MVS5 230 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 E5RI56 91 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CFLARO15519 480 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 NPHS1O60500 1241 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SMIM24O75264 130 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 RFPL2O75678 378 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ATP6AP2O75787 350 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 TM7SF2O76062 418 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 TPBGLP0DKB5 382 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CD1DP15813 335 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SYN1P17600 705 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ITGB6P18564 788 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 FDXRP22570 491 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 DNAJB1P25685 340 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CDC25CP30307 473 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CD70P32970 193 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ERVFC1P60507 584 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ACVR1Q04771 509 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 LMAN2Q12907 356 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 RCN1Q15293 331 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 OR4D1Q15615 310 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 DNAL1Q4LDG9 190 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 PPM1LQ5SGD2 360 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ARMC12Q5T9G4 340 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ZNF697Q5TEC3 545 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 C6orf163Q5TEZ5 329 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 AFTPHQ6ULP2 937 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 FAM43BQ6ZT52 329 aaPredicted RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 LYSMD3Q7Z3D4 306 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 PIWIL4Q7Z3Z4 852 aaKnown RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 NECAB2Q7Z6G3 386 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CUZD1Q86UP6 607 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ULK2Q8IYT8 1036 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 DEFB107AQ8IZN7 70 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CMTM8Q8IZV2 173 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 PTGR2Q8N8N7 351 aaPredicted RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 KDM1BQ8NB78 822 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CCDC126Q96EE4 140 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 GCNAQ96QF7 691 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SLC46A2Q9BY10 475 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ZBP1Q9H171 429 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 RETREG1Q9H6L5 497 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 DCLRE1BQ9H816 532 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CERS4Q9HA82 394 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 TLR9Q9NR96 1032 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 TAS2R13Q9NYV9 303 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CXXC1Q9P0U4 656 aaPredicted RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 LHX3Q9UBR4 397 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 VTI1BQ9UEU0 232 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CCL26Q9Y258 94 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 PKP3Q9Y446 797 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SLC30A1Q9Y6M5 507 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 MYOFQ9NZM1 2061 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SUPT3HB4E1H0 165 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 F8W8V4 182 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SLCO1B7G3V0H7 640 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 H3BMM5 538 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 LEFTY2O00292 366 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 PPP6CO00743 305 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 GREM1O60565 184 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 LILRB3O75022 631 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 NIPSNAP2O75323 286 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SUPT3HO75486 399 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 GPC4O75487 556 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 WFS1O76024 890 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 BAG2O95816 211 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 FGBP02675 491 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ADH1AP07327 375 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 ZNF37AP17032 561 aaPredicted RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 OGNP20774 298 aaKnown RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 IMPDH1P20839 514 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CES1P23141 567 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 PIK3R1P27986 724 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 CTSOP43234 321 aaPredicted RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 STK19P49842 368 aaPredicted RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 TIAL1Q01085 375 aaKnown RBP eCLIP4.85□□□□□ -1.632e-9■■■□□ 16.3
TM4SF1-202ENST00000472441 BCL2L1Q07817 233 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 NAA25Q14CX7 972 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 INO80DQ53TQ3 878 aaPredicted RBP4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 RETSATQ6NUM9 610 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 FAM151BQ6UXP7 276 aa4.85□□□□□ -1.63
TM4SF1-202ENST00000472441 SNX32Q86XE0 403 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms