RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 HSP90AA4PQ58FG1 418 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 PNCKQ6P2M8 343 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 WDR59Q6PJI9 974 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 LIPIQ6XZB0 460 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 PYROXD2Q8N2H3 581 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 BBS5Q8N3I7 341 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 NETO2Q8NC67 525 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 OR4D9Q8NGE8 314 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 CCDC74BQ96LY2 380 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 MCEEQ96PE7 176 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 CLSTN2Q9H4D0 955 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 RDH14Q9HBH5 336 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 MRPL40Q9NQ50 206 aaKnown RBP9.12□□□□□ -0.95
CPSF4-211ENST00000471455 FAM207AQ9NSI2 230 aaPredicted RBP9.12□□□□□ -0.95
CPSF4-211ENST00000471455 TAB2Q9NYJ8 693 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 TAAR2Q9P1P5 351 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 ANAPC2Q9UJX6 822 aa9.12□□□□□ -0.95
CPSF4-211ENST00000471455 ANKRD36A6QL64 1941 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 IGHV5-10-1A0A0J9YXX1 117 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 CDC14CA4D256 554 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 B4E171 279 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 J3KR12 359 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 PSMD11O00231 422 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 AGRPO00253 132 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 BUB1BO60566 1050 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 SOCS5O75159 536 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 PRKCGP05129 697 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 PYGLP06737 847 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 CHRNB2P17787 502 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 TEAD1P28347 426 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 VIPR1P32241 457 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 TSPAN7P41732 249 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 GNPDA1P46926 289 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 PPM1FP49593 454 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 PAPOLAP51003 745 aaKnown RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 LIMK2P53671 638 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 POLE2P56282 527 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 JAM2P57087 298 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 OR1D5P58170 312 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 CYP4F2P78329 520 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 GPLD1P80108 840 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 MC1RQ01726 317 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 IL10RBQ08334 325 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 ZNF235Q14590 738 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 TLR1Q15399 786 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 DBN1Q16643 649 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 COLEC12Q5KU26 742 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 DCAF12Q5T6F0 453 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 MON1BQ7L1V2 547 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 HEATR4Q86WZ0 1026 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 C17orf82Q86X59 251 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 ZSWIM9Q86XI8 627 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 CACNA2D3Q8IZS8 1091 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 NDUFAF2Q8N183 169 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 TSEN2Q8NCE0 465 aaKnown RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 NEK11Q8NG66 645 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 NSMCE1Q8WV22 266 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 HTR3CQ8WXA8 447 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 NKD1Q969G9 470 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 AHCYL2Q96HN2 611 aaKnown RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 CELF6Q96J87 481 aaKnown RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 ZNF599Q96NL3 588 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 NUDT22Q9BRQ3 303 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 ZPBPQ9BS86 351 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 SLC12A9Q9BXP2 914 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 VPS16Q9H269 839 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 STN1Q9H668 368 aaKnown RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 NLRC4Q9NPP4 1024 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 SLC39A1Q9NY26 324 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 KCNK4Q9NYG8 393 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 AP4E1Q9UPM8 1137 aa9.11□□□□□ -0.95
CPSF4-211ENST00000471455 ARHGEF17Q96PE2 2063 aaPredicted RBP9.11□□□□□ -0.95
CPSF4-211ENST00000471455 NBASA2RRP1 2371 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 GOLGA6CA6NDK9 693 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 GOLGA6BA6NDN3 693 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 DFFAO00273 331 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 B4GAT1O43505 415 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 DUX1O43812 170 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 RAD1O60671 282 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 RNF8O76064 485 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 ECEL1O95672 775 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 CPP00450 1065 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 FGF1P05230 155 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 IVLP07476 585 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 GOLGA6DP0CG33 693 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 THRAP10827 490 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 CCL4P13236 92 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 LIFP15018 202 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 UGT1A3P35503 534 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 CASRP41180 1078 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SCNN1BP51168 640 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 CDK3Q00526 305 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SRSF1Q07955 248 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■■□ 23.2
CPSF4-211ENST00000471455 SQSTM1Q13501 440 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 LRP8Q14114 963 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 SEPT6Q14141 434 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 CLCA4Q14CN2 919 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 RALGPS1Q5JS13 557 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 KCTD16Q68DU8 428 aa9.1□□□□□ -0.95
CPSF4-211ENST00000471455 RAET1GQ6H3X3 334 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms