RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 GOLGA8KD6RF30 607 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 GOLGA8TH3BQL2 631 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TSPAN6O43657 245 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TCEA3O75764 348 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 RNASEH2AO75792 299 aaKnown RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 RPP40O75818 363 aaKnown RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 FAM155BO75949 473 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 NEBLO76041 1014 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 S1PR4O95977 384 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 AHSGP02765 367 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 DNTTP04053 509 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TUBBP07437 444 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 NUDT17P0C025 328 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 ERVK-10P10266 1014 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF30P17039 623 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 IGFALSP35858 605 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 FNTBP49356 437 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 POLR2LP62875 67 aaKnown RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 FAM193AP78312 1265 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TMPRSS15P98073 1019 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 DPTQ07507 201 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 HLTFQ14527 1009 aaKnown RBP eCLIP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 E2F5Q15329 346 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 CHRNA6Q15825 494 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TYSND1Q2T9J0 566 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 ATP13A5Q4VNC0 1218 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 DNAJC21Q5F1R6 531 aaKnown RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 SPDYCQ5MJ68 293 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 SDE2Q6IQ49 451 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 NEK5Q6P3R8 708 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF449Q6P9G9 518 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 C3orf62Q6ZUJ4 267 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TRMT10CQ7L0Y3 403 aaKnown RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 GLT6D1Q7Z4J2 308 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 LDB1Q86U70 411 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TRIM69Q86WT6 500 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 HORMAD1Q86X24 394 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 DENND6AQ8IWF6 608 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 CYP4X1Q8N118 509 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 ZBTB44Q8NCP5 570 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 OR2W6PQ8NHA6 318 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 FBF1Q8TES7 1133 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 NAT14Q8WUY8 206 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 DCAKDQ8WVC6 231 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 TOE1Q96GM8 510 aaKnown RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 COX14Q96I36 57 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 LENG8Q96PV6 779 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 P2RY12Q9H244 342 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 MFSD1Q9H3U5 465 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 ACSS3Q9H6R3 686 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 PREBQ9HCU5 417 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 POLMQ9NP87 494 aaPredicted RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 SMOXQ9NWM0 555 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 HACD3Q9P035 362 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 INVSQ9Y283 1065 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 CA5BQ9Y2D0 317 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 ST14Q9Y5Y6 855 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 OAS3Q9Y6K5 1087 aaKnown RBP9.85□□□□□ -0.83
SF3A1-207ENST00000471342 PRSS21Q9Y6M0 314 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 RPS6KL1Q9Y6S9 549 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 LRRK1Q38SD2 2015 aa9.85□□□□□ -0.83
SF3A1-207ENST00000471342 EML5Q05BV3 1969 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 A0A1W2PR77 199 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 RGSL1A5PLK6 1076 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GOLGA6CA6NDK9 693 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GOLGA6BA6NDN3 693 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 POM121BA6NF01 834 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 METTL12A8MUP2 240 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 FOXO6A8MYZ6 492 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 AP3B1O00203 1094 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 RNGTTO60942 597 aaKnown RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 VAPBO95292 243 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 PAK4O96013 591 aaPredicted RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 WNT1P04628 370 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GSTA2P09210 222 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GOLGA6DP0CG33 693 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 CD6P30203 668 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 LMAN1P49257 510 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 CCR3P51677 355 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 CCR5P51681 352 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 PGGT1BP53609 377 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 PTPN5P54829 565 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 PFN3P60673 137 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 BNC1Q01954 994 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 SMAD1Q15797 465 aaKnown RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 KBTBD12Q3ZCT8 623 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 SPANXN3Q5MJ09 141 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 FBXL19Q6PCT2 694 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 KIAA1324Q6UXG2 1013 aaKnown RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GCNT7Q6ZNI0 430 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 USP45Q70EL2 814 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 ZNF765Q7L2R6 523 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 FAM124AQ86V42 546 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 KBTBD6Q86V97 674 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 OR2T34Q8NGX1 318 aa9.84□□□□□ -0.83
SF3A1-207ENST00000471342 UHMK1Q8TAS1 419 aaKnown RBP9.84□□□□□ -0.83
SF3A1-207ENST00000471342 GSDMBQ8TAX9 411 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms