RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PLIN3O60664 434 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 KLF8O95600 359 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 IGSF6O95976 241 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 MAGEA9P43362 315 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 TNFRSF4P43489 277 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 KIR2DL1P43626 348 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CXCL12P48061 93 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 PXNP49023 591 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 SLC12A2P55011 1212 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 TRAF2Q12933 501 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 ARMC12Q5T9G4 340 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 EGFLAMQ63HQ2 1017 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 TMEM215Q68D42 235 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 RAPH1Q70E73 1250 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 GLT6D1Q7Z4J2 308 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CMC1Q7Z7K0 106 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CLEC14AQ86T13 490 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 ZNF513Q8N8E2 541 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 IL17RCQ8NAC3 791 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 TXNDC5Q8NBS9 432 aaKnown RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 TSPAN17Q96FV3 270 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 TBATAQ96M53 351 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 ACOX2Q99424 681 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CEP44Q9C0F1 390 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 KLHL14Q9P2G3 628 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 SLC25A13Q9UJS0 675 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 MID2Q9UJV3 735 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 CORO1CQ9ULV4 474 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-208ENST00000471322 HS3ST2Q9Y278 367 aa17.47■□□□□ 0.39
HSPG2-208ENST00000471322 FAM95CA0A1B0GW59 222 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 FZD6O60353 706 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 SOCS5O75159 536 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 TROVE2P10155 538 aaKnown RBP eCLIP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 STMN1P16949 149 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 LPOP22079 712 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 GRIA4P48058 902 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 CSRP3P50461 194 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 ARSDP51689 593 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 ZNF140P52738 457 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 EPHB1P54762 984 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 RAB10P61026 200 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 SNRPD1P62314 119 aaKnown RBP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 BCL2L1Q07817 233 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 IFT88Q13099 833 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 PREPLQ4J6C6 727 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 NUDT18Q6ZVK8 323 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 PTAR1Q7Z6K3 402 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 DNAJC1Q96KC8 554 aaKnown RBP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 TSSK1BQ9BXA7 367 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 INTS6Q9UL03 887 aaKnown RBP17.46■□□□□ 0.39
HSPG2-208ENST00000471322 SLC27A6Q9Y2P4 619 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 ACOT9Q9Y305 439 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 KCTD3Q9Y597 815 aa17.46■□□□□ 0.39
HSPG2-208ENST00000471322 A0A087X1B8 175 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 WASH3PC4AMC7 463 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 K7ERQ8 282 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CD3EAPO15446 510 aaKnown RBP17.45■□□□□ 0.38
HSPG2-208ENST00000471322 HAUS5O94927 633 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 PGLSO95336 258 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 TGDSO95455 350 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 PROCP04070 461 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 PDHA1P08559 390 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CHRM1P11229 460 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-208ENST00000471322 PABPC1P11940 636 aaKnown RBP17.45■□□□□ 0.38
HSPG2-208ENST00000471322 OGNP20774 298 aaKnown RBP17.45■□□□□ 0.38
HSPG2-208ENST00000471322 BGNP21810 368 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CCR3P51677 355 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 DMWDQ09019 674 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 ATXN7L2Q5T6C5 722 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-208ENST00000471322 AFTPHQ6ULP2 937 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 OR4L1Q8NH43 312 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CYB5D2Q8WUJ1 264 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 PDCD6IPQ8WUM4 868 aaKnown RBP17.45■□□□□ 0.38
HSPG2-208ENST00000471322 SREK1Q8WXA9 508 aaKnown RBP17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CDKN2AIPNLQ96HQ2 116 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 HHIPQ96QV1 700 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 C19orf43Q9BQ61 176 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 ATP13A3Q9H7F0 1226 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CAB39LQ9H9S4 337 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 MAGEE1Q9HCI5 957 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 SLCO1B3Q9NPD5 702 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CACNA2D2Q9NY47 1150 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 EMCNQ9ULC0 261 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 SPO11Q9Y5K1 396 aa17.45■□□□□ 0.38
HSPG2-208ENST00000471322 CCDC162PA2VCL2 907 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 PFDN6O15212 129 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 SMAD6O43541 496 aaKnown RBP17.44■□□□□ 0.38
HSPG2-208ENST00000471322 GSRP00390 522 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 GOT2P00505 430 aaKnown RBP17.44■□□□□ 0.38
HSPG2-208ENST00000471322 PIRTP0C851 137 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 ABCG1P45844 678 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 KPNA2P52292 529 aaKnown RBP17.44■□□□□ 0.38
HSPG2-208ENST00000471322 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 CCDC121Q6ZUS5 278 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 OTOAQ7RTW8 1153 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 SLC41A1Q8IVJ1 513 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 CHPFQ8IZ52 775 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 PCDH20Q8N6Y1 951 aaKnown RBP17.44■□□□□ 0.38
HSPG2-208ENST00000471322 GPATCH11Q8N954 259 aa17.44■□□□□ 0.38
HSPG2-208ENST00000471322 OR2AP1Q8NGE2 309 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms