RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ENTPD2Q9Y5L3 495 aa13.48□□□□□ -0.25
HMGN1-211ENST00000471260 ERLIN1O75477 346 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 IPO7O95373 1038 aaKnown RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 PDHA1P08559 390 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 ZFXP17010 805 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 MCM3P25205 808 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 CYLC1P35663 651 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 ETV3P41162 512 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 PCBP4P57723 403 aaKnown RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 CDK3Q00526 305 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 GBE1Q04446 702 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 EIF3IQ13347 325 aaKnown RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 DENND2CQ68D51 928 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 RAET1GQ6H3X3 334 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 Q6ZVL8 140 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 ZNF765Q7L2R6 523 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 HSD11B1LQ7Z5J1 315 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 HEATR4Q86WZ0 1026 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 CPNE8Q86YQ8 564 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 CCDC13Q8IYE1 715 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 NRSN1Q8IZ57 195 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 PELI3Q8N2H9 469 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 KYQ8NBH2 561 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 CCNYQ8ND76 341 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 FAM46DQ8NEK8 389 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 ARRDC2Q8TBH0 407 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 GPBAR1Q8TDU6 330 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 RAPGEF5Q92565 580 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 LIN37Q96GY3 246 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 HIC2Q96JB3 615 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 SLC46A1Q96NT5 459 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 LYSMD1Q96S90 227 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 DESI2Q9BSY9 194 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 TDRD1Q9BXT4 1180 aaKnown RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 MAK16Q9BXY0 300 aaKnown RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 GSDMCQ9BYG8 508 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 FRMD8Q9BZ67 464 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 TSGA10Q9BZW7 698 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 TMEM168Q9H0V1 697 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 MRPL40Q9NQ50 206 aaKnown RBP13.47□□□□□ -0.25
HMGN1-211ENST00000471260 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 SIRPGQ9P1W8 387 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 PRDM4Q9UKN5 801 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 RAB21Q9UL25 225 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 SLC17A4Q9Y2C5 497 aa13.47□□□□□ -0.25
HMGN1-211ENST00000471260 DSPP15924 2871 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 LRRD1A4D1F6 860 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 NUDT21O43809 227 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 NDUFA10O95299 355 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 CEACAM5P06731 702 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 IVLP07476 585 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 RBMS1P29558 406 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 GPR1P46091 355 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 PTSQ03393 145 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 PPIDQ08752 370 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 ILF3Q12906 894 aaKnown RBP eCLIP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 SLC10A2Q12908 348 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 C14orf28Q4W4Y0 310 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 TEX35Q5T0J7 233 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 LRRC66Q68CR7 880 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 KCTD16Q68DU8 428 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 SLC9A4Q6AI14 798 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 CRTC1Q6UUV9 634 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 ADAMTSL4Q6UY14 1074 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 TSPAN33Q86UF1 283 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 ARL14Q8N4G2 192 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 WDR36Q8NI36 951 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 CCDC74AQ96AQ1 378 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 SCARF2Q96GP6 870 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 ATXN7L3BQ96GX2 97 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 TMEM74Q96NL1 305 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 GFM1Q96RP9 751 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 BRD8Q9H0E9 1235 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 DPEP2Q9H4A9 486 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 CARS2Q9HA77 564 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 DDX56Q9NY93 547 aaKnown RBP13.46□□□□□ -0.25
HMGN1-211ENST00000471260 MOSPD1Q9UJG1 213 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 SATB2Q9UPW6 733 aa13.46□□□□□ -0.25
HMGN1-211ENST00000471260 ZFYVE26Q68DK2 2539 aa13.46□□□□□ -0.26
HMGN1-211ENST00000471260 CCDC187A0A096LP49 1063 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 CAPN8A6NHC0 703 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 APOL1O14791 398 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 ZW10O43264 779 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 NOBOXO60393 691 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 MAP3K6O95382 1288 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 PRLP01236 227 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 HLA-DQB2P05538 268 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 CTPS1P17812 591 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 ITPKBP27987 946 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 IFI35P80217 286 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 DSC2Q02487 901 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 CKAP4Q07065 602 aaKnown RBP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 GPS2Q13227 327 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 HLTFQ14527 1009 aaKnown RBP eCLIP13.45□□□□□ -0.26
HMGN1-211ENST00000471260 PDK1Q15118 436 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 TERF2Q15554 542 aa13.45□□□□□ -0.26
HMGN1-211ENST00000471260 ODF2Q5BJF6 829 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms