RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ISL1P61371 349 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 RPP30P78346 268 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SORDQ00796 357 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TLE2Q04725 743 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TRPC3Q13507 836 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 GPR68Q15743 365 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 KRT24Q2M2I5 525 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 CCDC96Q2M329 555 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 ALG11Q2TAA5 492 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SLC9B1Q4ZJI4 515 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SIRPB2Q5JXA9 342 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 NAA35Q5VZE5 725 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 GGNBP1Q5YKI7 109 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 FRG2Q64ET8 278 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 PLA2G4FQ68DD2 849 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 PLEKHA7Q6IQ23 1121 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TRNP1Q6NT89 227 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 METTL2BQ6P1Q9 378 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 CPLX2Q6PUV4 134 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 PQLC2Q6ZP29 291 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 KCTD8Q6ZWB6 473 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SLC46A3Q7Z3Q1 461 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF34Q8IZ26 560 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 RNF113BQ8IZP6 322 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SPATA6LQ8N4H0 392 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SPEM1Q8N4L4 309 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 METTL27Q8N6F8 245 aaPredicted RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 CADM4Q8NFZ8 388 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SLC38A5Q8WUX1 472 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 FBXO17Q96EF6 278 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 CDCA5Q96FF9 252 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 METTL2AQ96IZ6 378 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SLC41A2Q96JW4 573 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 MTERF1Q99551 399 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SH3GL2Q99962 352 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 FAM110AQ9BQ89 295 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SYT17Q9BSW7 474 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 H2AFJQ9BTM1 129 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TRMT61BQ9BVS5 477 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SLC25A18Q9H1K4 315 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF696Q9H7X3 374 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SEBOXQ9HB31 216 aaPredicted RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SLC6A13Q9NSD5 602 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TMEM30AQ9NV96 361 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 HCFC1R1Q9NWW0 138 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 RRN3Q9NYV6 651 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 SARDHQ9UL12 918 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TTC7AQ9ULT0 858 aaPredicted RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 PADI3Q9ULW8 664 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 TCF19Q9Y242 345 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 DLGAP4Q9Y2H0 992 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 AAR2Q9Y312 384 aaKnown RBP1.4□□□□□ -2.19
UBXN4-207ENST00000471246 LOXL2Q9Y4K0 774 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 DGKBQ9Y6T7 804 aa1.4□□□□□ -2.19
UBXN4-207ENST00000471246 A0A1W2PQM1 296 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 RRN3P2A6NIE6 340 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 TTC36A6NLP5 189 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 USP17L23D6RBM5 183 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 TSPAN4O14817 238 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 NCAM2O15394 837 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 SEC14L5O43304 696 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 TNFSF14O43557 240 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 WDR1O75083 606 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 AMBPP02760 352 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 SERPINB2P05120 415 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 HSD3B1P14060 373 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 POLR2CP19387 275 aaPredicted RBP1.39□□□□□ -2.19
UBXN4-207ENST00000471246 CDAP32320 146 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 ABCD1P33897 745 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 CDKN1AP38936 164 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 ARL1P40616 181 aaPredicted RBP1.39□□□□□ -2.19
UBXN4-207ENST00000471246 FASLGP48023 281 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 GNAQP50148 359 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 TAS2R38P59533 333 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 VAMP2P63027 116 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 CSNK2A1P68400 391 aaPredicted RBP1.39□□□□□ -2.19
UBXN4-207ENST00000471246 PDE1BQ01064 536 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 FOXM1Q08050 763 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 NEXNQ0ZGT2 675 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 SREBF2Q12772 1141 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 FOXD4Q12950 439 aaPredicted RBP1.39□□□□□ -2.19
UBXN4-207ENST00000471246 CAMK1Q14012 370 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 FGFBP1Q14512 234 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF234Q14588 700 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 CCDC6Q16204 474 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 PRICKLE4Q2TBC4 344 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 COL28A1Q2UY09 1125 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 USP41Q3LFD5 358 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 C6orf141Q5SZD1 244 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 GPATCH4Q5T3I0 446 aaKnown RBP1.39□□□□□ -2.19
UBXN4-207ENST00000471246 DUS1LQ6P1R4 473 aaKnown RBP1.39□□□□□ -2.19
UBXN4-207ENST00000471246 CYP26C1Q6V0L0 522 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 RAD9BQ6WBX8 426 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 ZNF852Q6ZMS4 543 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 ASB18Q6ZVZ8 466 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 DPPA4Q7L190 304 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 HAPLN4Q86UW8 402 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 WDSUB1Q8N9V3 476 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 ACVR1CQ8NER5 493 aa1.39□□□□□ -2.19
UBXN4-207ENST00000471246 CSNK2A3Q8NEV1 391 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms