RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 C1QTNF7Q9BXJ2 289 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 FAM83DQ9H4H8 585 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 ASB8Q9H765 288 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 SUDS3Q9H7L9 328 aaPredicted RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D17Q9HA65 648 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 PLAC1Q9HBJ0 212 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 LGALS13Q9UHV8 139 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 MUTYHQ9UIF7 546 aa9.74□□□□□ -0.85
CCM2-204ENST00000470837 NOVA2Q9UNW9 492 aaKnown RBP9.74□□□□□ -0.85
CCM2-204ENST00000470837 REV3LO60673 3130 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 A0A1W2PQF6 199 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 KRBA1A5PL33 1030 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 CHURC1-FNTBB4DL54 471 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 AP1G1O43747 822 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SRP72O76094 671 aaKnown RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 RALBP11234 206 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 BPIP17213 487 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 LHCGRP22888 699 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SLC1A2P43004 574 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 POLD2P49005 469 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 COPAP53621 1224 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 DCDC1P59894 354 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 PTSQ03393 145 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 DNAJC3Q13217 504 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SGCGQ13326 291 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 CTBP1Q13363 440 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 NFATC2Q13469 925 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 PTPRCAPQ14761 206 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SEPT7Q16181 437 aaKnown RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 CDKN3Q16667 212 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 TMEM52BQ4KMG9 183 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SETMARQ53H47 684 aaPredicted RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 MROH9Q5TGP6 573 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 KCTD16Q68DU8 428 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 LIPIQ6XZB0 460 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 USP30Q70CQ3 517 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SYT13Q7L8C5 426 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 CILP2Q8IUL8 1156 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SRRM1Q8IYB3 904 aaKnown RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 KRT222Q8N1A0 295 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 ARFGAP2Q8N6H7 521 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 GPATCH11Q8N954 259 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 GPR150Q8NGU9 434 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 GDAP1Q8TB36 358 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 ZNF398Q8TD17 642 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 HMGB4Q8WW32 186 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 NUS1Q96E22 293 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 TSPAN17Q96FV3 270 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 DCUN1D1Q96GG9 259 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 ATXN7L3BQ96GX2 97 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 VPS39Q96JC1 886 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 TSNARE1Q96NA8 513 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 RBBP8Q99708 897 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 DHRS4Q9BTZ2 278 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 ZSCAN5AQ9BUG6 496 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 OSBPL6Q9BZF3 934 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 FOXQ1Q9C009 403 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 MKRN2Q9H000 416 aaKnown RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 IQCGQ9H095 443 aaKnown RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 RHOJQ9H4E5 214 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 IL26Q9NPH9 171 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SMYD2Q9NRG4 433 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 INTS10Q9NVR2 710 aaKnown RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 CTNNAL1Q9UBT7 734 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 GGT7Q9UJ14 662 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 FZD4Q9ULV1 537 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 CORO1CQ9ULV4 474 aaPredicted RBP9.73□□□□□ -0.85
CCM2-204ENST00000470837 ITM2BQ9Y287 266 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 FADS3Q9Y5Q0 445 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 TICRRQ7Z2Z1 1910 aa9.73□□□□□ -0.85
CCM2-204ENST00000470837 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 COL4A3Q01955 1670 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D3DA0A087WVF3 549 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D3IA0A087WXS9 549 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D3EA0A087X179 549 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D3KA0A087X1G2 549 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 A0A0U1RQS6 177 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 UBA6A0AVT1 1052 aaPredicted RBP9.72□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D3FA6NER0 549 aaPredicted RBP9.72□□□□□ -0.85
CCM2-204ENST00000470837 ANTXRLA6NF34 631 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 OR51F1A6NGY5 319 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 LRRC72A6NJI9 287 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D3LB9A6J9 549 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TRIM49D1C9J1S8 452 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 CFAP99D6REC4 459 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 PLK4O00444 970 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 AREL1O15033 823 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 MMP20O60882 483 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 FAM155BO75949 473 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TM7SF2O76062 418 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 PYGLP06737 847 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 ITGA2BP08514 1039 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 C1SP09871 688 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 TBC1D3HP0C7X1 549 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 C6P13671 934 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 ZNF7P17097 686 aaPredicted RBP9.72□□□□□ -0.85
CCM2-204ENST00000470837 NDUFV2P19404 249 aa9.72□□□□□ -0.85
CCM2-204ENST00000470837 COL9A1P20849 921 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms