RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 TMBIM1Q969X1 311 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 CITED4Q96RK1 184 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 PPP1R16BQ96T49 567 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 LPIN3Q9BQK8 851 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 GMIPQ9P107 970 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 AASSQ9UDR5 926 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 VWA7Q9Y334 891 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 TESMINQ9Y4I5 508 aa9.53□□□□□ -0.88
NHLRC3-203ENST00000470258 ZNF99A8MXY4 864 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 VWA5AO00534 786 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 NPHS1O60500 1241 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 PIGRP01833 764 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 TAS2R39P59534 338 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 HIST2H2ACQ16777 129 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 PSTKQ8IV42 348 aaKnown RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 SP8Q8IXZ3 490 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 ASCC1Q8N9N2 400 aaKnown RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 SLC7A14Q8TBB6 771 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 RPL3LQ92901 407 aaKnown RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 LRRC58Q96CX6 371 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 SH3GL1Q99961 368 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 HOPXQ9BPY8 73 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 ASPSCR1Q9BZE9 553 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 REXO4Q9GZR2 422 aaKnown RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 C2orf40Q9H1Z8 148 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 GBA2Q9HCG7 927 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 EIF2B3Q9NR50 452 aaKnown RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 MRGBPQ9NV56 204 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 IL37Q9NZH6 218 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 SIX4Q9UIU6 781 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 CAB39Q9Y376 341 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 M0QX08 132 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 B4GALT5O43286 388 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 FYNP06241 537 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 C7P10643 843 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 KCNA2P16389 499 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 ARCN1P48444 511 aaKnown RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 DAG1Q14118 895 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 ACAP2Q15057 778 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 FAM214AQ32MH5 1076 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 PPP1R26Q5T8A7 1209 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 FAM83FQ8NEG4 500 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 RDM1Q8NG50 284 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 OR13J1Q8NGT2 312 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 TUBGCP3Q96CW5 907 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 C19orf60Q96EN9 201 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 ITCHQ96J02 903 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 COQ7Q99807 217 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 IRF2BPLQ9H1B7 796 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 AKTIPQ9H8T0 292 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 RPF1Q9H9Y2 349 aaKnown RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 MEAF6Q9HAF1 191 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 ZNF221Q9UK13 617 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 ITM2BQ9Y287 266 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 FER1L6Q2WGJ9 1857 aa9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 COL11A2P13942 1736 aaPredicted RBP9.52□□□□□ -0.89
NHLRC3-203ENST00000470258 PDZK1P1A8MUH7 402 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 H0YAE9 185 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 ZBTB24O43167 697 aaPredicted RBP9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 CRYZL1O95825 349 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 PRKCAP17252 672 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 ITGB6P18564 788 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 ITIH1P19827 911 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 IL5RAQ01344 420 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 TNFAIP2Q03169 654 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 CD47Q08722 323 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 LAPTM5Q13571 262 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 RBM48Q5RL73 367 aaKnown RBP9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 EEF1DP3Q658K8 133 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 STEAP3Q658P3 488 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 TTC23LQ6PF05 361 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 P2RY8Q86VZ1 359 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 REM2Q8IYK8 340 aaPredicted RBP9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 MIER2Q8N344 545 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 CELF2-AS1Q8N7Q2 184 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 CHDHQ8NE62 594 aaPredicted RBP9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 TRIB2Q92519 343 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 NDRG1Q92597 394 aaKnown RBP9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 PROX1Q92786 737 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 MUL1Q969V5 352 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 BIRC7Q96CA5 298 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 DSN1Q9H410 356 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 LRRC4Q9HBW1 653 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 CPNE5Q9HCH3 593 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 PRDM8Q9NQV8 689 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 CPSF3Q9UKF6 684 aaKnown RBP9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 BTRCQ9Y297 605 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 PMF1-BGLAPU3KQ54 211 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 GOLGA8CPA6NN73 597 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 A8MT66 165 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 HACD1B0YJ81 288 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 FXYD1O00168 92 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 SLC22A1O15245 554 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 ICMTO60725 284 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 SOAT2O75908 522 aa9.51□□□□□ -0.89
NHLRC3-203ENST00000470258 AP2A1O95782 977 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms