RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
LINC00173-201ENST00000470091 ACTL7AQ9Y615 435 aa13.67□□□□□ -0.22
LINC00173-201ENST00000470091 MGAQ8IWI9 3026 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 SHROOM3Q8TF72 1996 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 ILVBLA1L0T0 632 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 E7EVH7 732 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 SMAPO00193 183 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 PRAMEF11O60813 436 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 NEBLO76041 1014 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 PAK4O96013 591 aaPredicted RBP13.66□□□□□ -0.22
LINC00173-201ENST00000470091 HNRNPA2B1P22626 353 aaKnown RBP13.66□□□□□ -0.22
LINC00173-201ENST00000470091 ABCG1P45844 678 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 LMAN1P49257 510 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 ARL4CP56559 192 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 INSM1Q01101 510 aaPredicted RBP13.66□□□□□ -0.22
LINC00173-201ENST00000470091 IL10RBQ08334 325 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 ILKQ13418 452 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 MTM1Q13496 603 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 SLMAPQ14BN4 828 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 HIF1AQ16665 826 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 PARP6Q2NL67 630 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 FNBP1LQ5T0N5 605 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 RETSATQ6NUM9 610 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 NEK5Q6P3R8 708 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 C22orf39Q6P5X5 142 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 KDM7AQ6ZMT4 941 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 LRRC69Q6ZNQ3 347 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 Q6ZSR6 202 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 RYBPQ8N488 228 aaPredicted RBP13.66□□□□□ -0.22
LINC00173-201ENST00000470091 CNTD1Q8N815 330 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 FATE1Q969F0 183 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 RBM15Q96T37 977 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC00173-201ENST00000470091 HDAC8Q9BY41 377 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 EPB41L4BQ9H329 900 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 CDC42EP4Q9H3Q1 356 aaKnown RBP13.66□□□□□ -0.22
LINC00173-201ENST00000470091 PDFQ9HBH1 243 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 GLOD4Q9HC38 313 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 RBM22Q9NW64 420 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC00173-201ENST00000470091 CLCA2Q9UQC9 943 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 RAI2Q9Y5P3 530 aa13.66□□□□□ -0.22
LINC00173-201ENST00000470091 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 ZNF821O75541 412 aaPredicted RBP13.65□□□□□ -0.22
LINC00173-201ENST00000470091 ACP1P24666 158 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 GKP32189 559 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 ETFBP38117 255 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 SPARCL1Q14515 664 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 FASTKD3Q14CZ7 662 aaKnown RBP13.65□□□□□ -0.22
LINC00173-201ENST00000470091 BBS9Q3SYG4 887 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 MSS51Q4VC12 460 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 CFAP58Q5T655 872 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 TMCO4Q5TGY1 634 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 CENPUQ71F23 418 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 ZNF534Q76KX8 674 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 PTAR1Q7Z6K3 402 aaPredicted RBP13.65□□□□□ -0.22
LINC00173-201ENST00000470091 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.65□□□□□ -0.22
LINC00173-201ENST00000470091 NSMCE1Q8WV22 266 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 FEM1CQ96JP0 617 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 HEPHQ9BQS7 1158 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 MLPHQ9BV36 600 aaPredicted RBP13.65□□□□□ -0.22
LINC00173-201ENST00000470091 SLC17A9Q9BYT1 436 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 VIPAS39Q9H9C1 493 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 NT5MQ9NPB1 228 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 EIF2B3Q9NR50 452 aaKnown RBP13.65□□□□□ -0.22
LINC00173-201ENST00000470091 DNAJC28Q9NX36 388 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 NINJ2Q9NZG7 142 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 FCF1Q9Y324 198 aaKnown RBP13.65□□□□□ -0.22
LINC00173-201ENST00000470091 WASF2Q9Y6W5 498 aa13.65□□□□□ -0.22
LINC00173-201ENST00000470091 COL5A1P20908 1838 aaPredicted RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 MYLKQ15746 1914 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 POM121BA6NF01 834 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 RRP8O43159 456 aaKnown RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 KDELR3O43731 214 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 BRINP1O60477 761 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 ZMPSTE24O75844 475 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 MT-CO3P00414 261 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 MAGEA4P43358 317 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 MMP13P45452 471 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 SERPINH1P50454 418 aaKnown RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 CCNHP51946 323 aaPredicted RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 E2F1Q01094 437 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 SLC20A2Q08357 652 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 SLC10A7Q0GE19 358 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 PDIA2Q13087 525 aaKnown RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 FGL2Q14314 439 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 LBRQ14739 615 aaKnown RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 RTP5Q14D33 572 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 HP1BP3Q5SSJ5 553 aaPredicted RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 PPP1R21Q6ZMI0 780 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 ZNF783Q6ZMS7 281 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 GCNT7Q6ZNI0 430 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 CEP128Q6ZU80 1094 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 TRMT10CQ7L0Y3 403 aaKnown RBP13.64□□□□□ -0.23
LINC00173-201ENST00000470091 ANKMY2Q8IV38 441 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 SLC22A18ASQ8N1D0 253 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 MCUQ8NE86 351 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 OR6K2Q8NGY2 324 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 OR4C6Q8NH72 309 aa13.64□□□□□ -0.23
LINC00173-201ENST00000470091 OXNAD1Q96HP4 312 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms