RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 PEAR1Q5VY43 1037 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-209ENST00000469852 CES3Q6UWW8 571 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 CYP2U1Q7Z449 544 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 FBXO25Q8TCJ0 367 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 ART4Q93070 314 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 SIGLEC10Q96LC7 697 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 RANBP9Q96S59 729 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 SRPK1Q96SB4 655 aaKnown RBP14.74□□□□□ -0.05
COL9A3-209ENST00000469852 SMOC1Q9H4F8 434 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 XAB2Q9HCS7 855 aaKnown RBP14.74□□□□□ -0.05
COL9A3-209ENST00000469852 CHRAC1Q9NRG0 131 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 PKD2L2Q9NZM6 624 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 BFARQ9NZS9 450 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 FKBPLQ9UIM3 349 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 DMTF1Q9Y222 760 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 TCAF1Q9Y4C2 921 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 PLXNB3Q9ULL4 1909 aa14.74□□□□□ -0.05
COL9A3-209ENST00000469852 LAMA1P25391 3075 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 A0A1W2PR77 199 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 C2orf81A6NN90 581 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 FADS2P1A8MWK0 482 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 PATE3B3GLJ2 98 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 PRAMEF26H0Y7S4 382 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 STX7O15400 261 aaKnown RBP14.73□□□□□ -0.05
COL9A3-209ENST00000469852 ADRA1DP25100 572 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 NMBRP28336 390 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 AKT2P31751 481 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 DRG2P55039 364 aaKnown RBP14.73□□□□□ -0.05
COL9A3-209ENST00000469852 PLTPP55058 493 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 DHX9Q08211 1270 aaKnown RBP14.73□□□□□ -0.05
COL9A3-209ENST00000469852 CALCOCO2Q13137 446 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 INPP5AQ14642 412 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 PCID2Q5JVF3 399 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 HP1BP3Q5SSJ5 553 aaPredicted RBP14.73□□□□□ -0.05
COL9A3-209ENST00000469852 TSTD2Q5T7W7 516 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 ESRP1Q6NXG1 681 aaKnown RBP14.73□□□□□ -0.05
COL9A3-209ENST00000469852 IGDCC3Q8IVU1 814 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 DENND6BQ8NEG7 585 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 OR13H1Q8NG92 308 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 OR13J1Q8NGT2 312 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 AP2M1Q96CW1 435 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 IL22Q9GZX6 179 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 ARRDC1-AS1Q9H2J1 176 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 FAM83DQ9H4H8 585 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 CAAP1Q9H8G2 361 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 IL26Q9NPH9 171 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 AASDHPPTQ9NRN7 309 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 ZDHHC18Q9NUE0 388 aa14.73□□□□□ -0.05
COL9A3-209ENST00000469852 ADAMTS9Q9P2N4 1935 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 HEATR9A2RTY3 570 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 SLU7O95391 586 aaKnown RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PRSS56P0CW18 603 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PSMA3P25788 255 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 ECHS1P30084 290 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 NUDT1P36639 197 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 CSNK1EP49674 416 aaKnown RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 RACK1P63244 317 aaKnown RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 XIAPP98170 497 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 FOXK2Q01167 660 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 BNC1Q01954 994 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 DPTQ07507 201 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PEX6Q13608 980 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 FASTKD3Q14CZ7 662 aaKnown RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 BBS9Q3SYG4 887 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 LAIR1Q6GTX8 287 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PNCKQ6P2M8 343 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 FAM151BQ6UXP7 276 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 ZNF765Q7L2R6 523 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 ABI3BPQ7Z7G0 1075 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 SYT12Q8IV01 421 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 NRSN1Q8IZ57 195 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 SLC22A18ASQ8N1D0 253 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 BBOF1Q8ND07 529 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PPHLN1Q8NEY8 458 aaKnown RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 KIFC1Q9BW19 673 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 LGR4Q9BXB1 951 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 SEMA4AQ9H3S1 761 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 SUDS3Q9H7L9 328 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PLAC1Q9HBJ0 212 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 FSCN3Q9NQT6 498 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 NLE1Q9NVX2 485 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 NFKBIL1Q9UBC1 381 aaPredicted RBP14.72□□□□□ -0.05
COL9A3-209ENST00000469852 TMPRSS11EQ9UL52 423 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 RAB23Q9ULC3 237 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 SOX13Q9UN79 622 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PKP3Q9Y446 797 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 OR1A2Q9Y585 309 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 ZNF292O60281 2723 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PI4KAP42356 2102 aa14.72□□□□□ -0.05
COL9A3-209ENST00000469852 PCDH15Q96QU1 1955 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 RGSL1A5PLK6 1076 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 OR51F1A6NGY5 319 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 SDR42E2A6NKP2 422 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 SMAPO00193 183 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 AP3B1O00203 1094 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 FPGTO14772 594 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 BCAT2O15382 392 aaPredicted RBP14.71□□□□□ -0.05
COL9A3-209ENST00000469852 UGT1A9O60656 530 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 PPFIA2O75334 1257 aa14.71□□□□□ -0.05
COL9A3-209ENST00000469852 UGT1A6P19224 532 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms