RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 CUZD1Q86UP6 607 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 DSELQ8IZU8 1212 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PTGR2Q8N8N7 351 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 KDM1BQ8NB78 822 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TRPC4APQ8TEL6 797 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 SEPT8Q92599 483 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 MCMBPQ9BTE3 642 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 RNF208Q9H0X6 261 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PCDHAC1Q9H158 963 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 COL4A4P53420 1690 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 H3BMM5 538 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 UBFD1O14562 309 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 SYN3O14994 580 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 MAGEC1O60732 1142 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 RHOBTB1O94844 696 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PRAMEF12O95522 483 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 RPLP2P05387 115 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ALPIP09923 528 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 LTA4HP09960 611 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 FUT4P22083 530 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CES1P23141 567 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CST5P28325 142 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 HOXD10P28358 340 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CASP2P42575 452 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 NDST2P52849 883 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ADARP55265 1226 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 OXCT1P55809 520 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 AP2B1P63010 937 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 FAM189BP81408 668 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CYLC2Q14093 348 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CCNIQ14094 377 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 TMEM259Q4ZIN3 620 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ZRANB3Q5FWF4 1079 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 DUS1LQ6P1R4 473 aaKnown RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 GLT6D1Q7Z4J2 308 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 FAM126AQ9BYI3 521 aaPredicted RBP9.42□□□□□ -0.9
TOP3A-203ENST00000469739 HIPK3Q9H422 1215 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 CLIC5Q9NZA1 410 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 FAM8A1Q9UBU6 413 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 ADAMTS6Q9UKP5 1117 aa9.42□□□□□ -0.9
TOP3A-203ENST00000469739 NUP214P35658 2090 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 TARM1B6A8C7 271 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ACSL4O60488 711 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 DNAJA2O60884 412 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 NIPSNAP2O75323 286 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 FGFR3P22607 806 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 CRABP2P29373 138 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 DPP6P42658 865 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF135P52742 658 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 BTKQ06187 659 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 AGAP9Q5VTM2 703 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 AFMIDQ63HM1 303 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 PAQR3Q6TCH7 311 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ARL14EPQ8N8R7 260 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 OR6Y1Q8NGX8 325 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 NUDT8Q8WV74 236 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ISL2Q96A47 359 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 RPL10LQ96L21 214 aaKnown RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 C3orf30Q96M34 536 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 SLC30A3Q99726 388 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ARPC5LQ9BPX5 153 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 MRPL57Q9BQC6 102 aaKnown RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 VN1R3Q9BXE9 311 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 VPS45Q9NRW7 570 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 DNMT3LQ9UJW3 386 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ANGPTL2Q9UKU9 493 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 PCDHB9Q9Y5E1 797 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 DOCK4Q8N1I0 1966 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 SUPT3HB4E1H0 165 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 H0Y626 953 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 CDC7O00311 574 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 IPO13O94829 963 aaKnown RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 C1RP00736 705 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 MBL2P11226 248 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ATP5F1P24539 256 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 HOXD9P28356 352 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 AGTR2P50052 363 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 RAP1GDS1P52306 607 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 POU4F1Q01851 419 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ZNF177Q13360 481 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 OR4D1Q15615 310 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 KIF19Q2TAC6 998 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 TRMT5Q32P41 509 aaKnown RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 TECRLQ5HYJ1 363 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 NCCRP1Q6ZVX7 275 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 NET1Q7Z628 596 aaPredicted RBP9.41□□□□□ -0.9
TOP3A-203ENST00000469739 PIANPQ8IYJ0 282 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 GALNT4Q8N4A0 578 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 SPPL2BQ8TCT7 592 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 HHIPL1Q96JK4 782 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 ECSITQ9BQ95 431 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 MID1IP1Q9NPA3 183 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 NSMCE4AQ9NXX6 385 aa9.41□□□□□ -0.9
TOP3A-203ENST00000469739 UBA2Q9UBT2 640 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms