RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 RPL10P27635 214 aaKnown RBP17.8■□□□□ 0.44
MCF2L-221ENST00000469415 OXCT1P55809 520 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 TCTN1Q2MV58 587 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 RARS2Q5T160 578 aaKnown RBP17.8■□□□□ 0.44
MCF2L-221ENST00000469415 ATXN7L2Q5T6C5 722 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-221ENST00000469415 PSAPL1Q6NUJ1 521 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 ARPINQ7Z6K5 226 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 NMD3Q96D46 503 aaKnown RBP17.8■□□□□ 0.44
MCF2L-221ENST00000469415 FUBP3Q96I24 572 aaKnown RBP eCLIP17.8■□□□□ 0.44
MCF2L-221ENST00000469415 CIB1Q99828 191 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 VCX3BQ9H321 246 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 ZNF385DQ9H6B1 395 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 MARCH5Q9NX47 278 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 PRPF19Q9UMS4 504 aaKnown RBP17.8■□□□□ 0.44
MCF2L-221ENST00000469415 AP4B1Q9Y6B7 739 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 PRAMEF11O60813 436 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 BAIAP3O94812 1187 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 EOMESO95936 686 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 PSMC3P17980 439 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 GRIA3P42263 894 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 SP3Q02447 781 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 PLD1Q13393 1074 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 MTX3Q5HYI7 312 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 UGT3A1Q6NUS8 523 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 BEND5Q7L4P6 421 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 GABPB2Q8TAK5 448 aaPredicted RBP17.8■□□□□ 0.44
MCF2L-221ENST00000469415 DNAJB14Q8TBM8 379 aa17.8■□□□□ 0.44
MCF2L-221ENST00000469415 C2orf78A6NCI8 922 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 SLC38A8A6NNN8 435 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 ZNF37AP17032 561 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 ATP5C1P36542 298 aaKnown RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 TIAL1Q01085 375 aaKnown RBP eCLIP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 LRRC8DQ7L1W4 858 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 RETREG3Q86VR2 466 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 ST13P4Q8IZP2 240 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 ARHGAP18Q8N392 663 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 CPSF7Q8N684 471 aaKnown RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 TWIST2Q8WVJ9 160 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 PRPF18Q99633 342 aaKnown RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 NOL11Q9H8H0 719 aaKnown RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 MRM3Q9HC36 420 aaKnown RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 UBA2Q9UBT2 640 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 ASB1Q9Y576 335 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 LOC285095A0A1B0GVY8 99 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 A0A1W2PQ45 241 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 A0A1W2PQY0 241 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 RPP40O75818 363 aaKnown RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 CRTAMO95727 393 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 RHOCP08134 193 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 PIK3CGP48736 1102 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 CMPK2Q5EBM0 449 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 RNF219Q5W0B1 726 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 CARNMT1Q8N4J0 409 aa17.79■□□□□ 0.44
MCF2L-221ENST00000469415 POLR3BQ9NW08 1133 aaPredicted RBP17.79■□□□□ 0.44
MCF2L-221ENST00000469415 A0A0J9YYE9 177 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 NRP2O60462 931 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 KATNA1O75449 491 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 PRAMEF12O95522 483 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 HOXD9P28356 352 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-221ENST00000469415 CORO1AP31146 461 aaKnown RBP17.78■□□□□ 0.44
MCF2L-221ENST00000469415 STX5Q13190 355 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 FAM45BPQ6NSW5 357 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 TRAF7Q6Q0C0 670 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 SETD3Q86TU7 594 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-221ENST00000469415 MYO1HQ8N1T3 1032 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 FAM45AQ8TCE6 357 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 RNF38Q9H0F5 515 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 SCUBE2Q9NQ36 999 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 FCF1Q9Y324 198 aaKnown RBP17.78■□□□□ 0.44
MCF2L-221ENST00000469415 SAC3D1A6NKF1 404 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 K7ERQ8 282 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 ACSL4O60488 711 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 ALPIP09923 528 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 ADGRE1Q14246 886 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 RBBP7Q16576 425 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 RAB44Q7Z6P3 723 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-221ENST00000469415 LRRC49Q8IUZ0 686 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 FUNDC1Q8IVP5 155 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 FBXO39Q8N4B4 442 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 FBXO22Q8NEZ5 403 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 BRSK1Q8TDC3 778 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 NR1H4Q96RI1 486 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-221ENST00000469415 TLR9Q9NR96 1032 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 PCDHB9Q9Y5E1 797 aa17.78■□□□□ 0.44
MCF2L-221ENST00000469415 AKAP10O43572 662 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 GUCA1CO95843 209 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 MTHFD2P13995 350 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 HERVK_113P63132 956 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 PARP15Q460N3 678 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 SLC30A9Q6PML9 568 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 SLC22A9Q8IVM8 553 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 KLHDC8BQ8IXV7 354 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 CPNE9Q8IYJ1 553 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 PELI3Q8N2H9 469 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 ERVK-6Q9BXR3 956 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 EPS15L1Q9UBC2 864 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 CROTQ9UKG9 612 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 WASH4PA8MWX3 477 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 TRIM38O00635 465 aa17.77■□□□□ 0.44
MCF2L-221ENST00000469415 AZIN1O14977 448 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms