RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TTC23Q5W5X9 447 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FAM205BPQ63HN1 556 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 STYK1Q6J9G0 422 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ACAD10Q6JQN1 1059 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TAF2Q6P1X5 1199 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PNCKQ6P2M8 343 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF790Q6PG37 636 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CORO6Q6QEF8 472 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CRTC3Q6UUV7 619 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ZNF782Q6ZMW2 699 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 OTOP3Q7RTS5 596 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 KRT77Q7Z794 578 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 STRA8Q7Z7C7 330 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 DSG4Q86SJ6 1040 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SLCO6A1Q86UG4 719 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 NOXA1Q86UR1 476 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ZBTB46Q86UZ6 589 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SLC22A16Q86VW1 577 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 C12orf40Q86WS4 652 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 RALGPS2Q86X27 583 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ERO1BQ86YB8 467 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CCDC103Q8IW40 242 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SLITRK4Q8IW52 837 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ZC3H7AQ8IWR0 971 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SLFN12Q8IYM2 578 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ZDHHC14Q8IZN3 488 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 DSELQ8IZU8 1212 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CLEC4FQ8N1N0 589 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SCML4Q8N228 414 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 UBE2J2Q8N2K1 259 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ATAD1Q8NBU5 361 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 C3orf58Q8NDZ4 430 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 BHLHE22Q8NFJ8 381 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PJA1Q8NG27 643 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 OR7A2PQ8NGA2 310 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 OR5T2Q8NGG2 359 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 OR8K5Q8NH50 307 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 NPLOC4Q8TAT6 608 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 LRRC20Q8TCA0 184 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 URGCPQ8TCY9 931 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FRS2Q8WU20 508 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 DNAJA4Q8WW22 397 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 C1orf54Q8WWF1 131 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FAM168AQ92567 244 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 HDAC2Q92769 488 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FBXL8Q96CD0 374 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TIFAQ96CG3 184 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CCDC124Q96CT7 223 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CENPNQ96H22 339 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 FAM84AQ96KN4 292 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 BBS4Q96RK4 519 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CAMKK2Q96RR4 588 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SH2D3AQ9BRG2 576 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TMEM246Q9BRR3 403 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 YIPF4Q9BSR8 244 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 MTG1Q9BT17 334 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 MTMR12Q9C0I1 747 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 NYXQ9GZU5 481 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TNKS2Q9H2K2 1166 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 NOL6Q9H6R4 1146 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ATP13A3Q9H7F0 1226 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 BRD9Q9H8M2 597 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 JMJD4Q9H9V9 463 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PRDM8Q9NQV8 689 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SACM1LQ9NTJ5 587 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 MBNL3Q9NUK0 354 aaKnown RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ACOXLQ9NUZ1 547 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SMOXQ9NWM0 555 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 TXNDC16Q9P2K2 825 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SLC17A7Q9P2U7 560 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 IP6K2Q9UHH9 426 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 RAPGEFL1Q9UHV5 662 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 KLHL21Q9UJP4 597 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 PCOLCE2Q9UKZ9 415 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SARDHQ9UL12 918 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 COG5Q9UP83 839 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 POLHQ9Y253 713 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ASB4Q9Y574 426 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 CORINQ9Y5Q5 1042 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
SF3B1-207ENST00000468925 SPATA31A3Q5VYP0 1347 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ATRNL1Q5VV63 1379 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 RIC1Q4ADV7 1423 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 ARFGEF2Q9Y6D5 1785 aa4.86□□□□□ -1.63
SF3B1-207ENST00000468925 HEATR9A2RTY3 570 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 DENND3A2RUS2 1198 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 C7orf72A4D263 438 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PRSS47A8MTI9 375 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 BBIP1A8MTZ0 92 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PRRT4C9JH25 899 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 hCG_2039718K7EN88 272 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TOR1AO14656 332 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TNPO2O14787 897 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ZBTB5O15062 677 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 LIASO43766 372 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PIP5K1CO60331 668 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PAGE1O75459 146 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PRDM1O75626 825 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 RFPL1O75677 317 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms