RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SNRNP25Q9BV90 132 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 TAPBPLQ9BX59 468 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CXorf56Q9H5V9 222 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 RNF186Q9NXI6 227 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 KCNK4Q9NYG8 393 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 DEC1Q9P2X7 70 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 MTRRQ9UBK8 725 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 RFXANKO14593 260 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 TMCC2O75069 709 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 SERPINA1P01009 418 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ERBB2P04626 1255 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ADRA1DP25100 572 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 PTPN9P43378 593 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 GRIA4P48058 902 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 BCAP31P51572 246 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ATP6V0D1P61421 351 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CYP4F2P78329 520 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CYP4F3Q08477 520 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ATXN7L2Q5T6C5 722 aaPredicted RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 FAM129CQ86XR2 697 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 TOP6BLQ8N6T0 577 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 TSEN15Q8WW01 171 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 C1orf50Q9BV19 199 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ABCG8Q9H221 673 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ZDHHC4Q9NPG8 344 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 EQTNQ9NQ60 294 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.7□□□□□ -1.02
HPS4-209ENST00000466781 NT5C1B-RDH14C9J2C7 533 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 F8VP50 259 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 LGR5O75473 907 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 FGF1P05230 155 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ACLYP53396 1101 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CASP9P55211 416 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 RTP1P59025 263 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 MAXP61244 160 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 IL17AQ16552 155 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 C9orf64Q5T6V5 341 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CDYL2Q8N8U2 506 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ZNF540Q8NDQ6 660 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CCDC54Q8NEL0 328 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 SUN3Q8TAQ9 357 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 FAM81AQ8TBF8 368 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ADAMTS15Q8TE58 950 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 FATE1Q969F0 183 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 RNF31Q96EP0 1072 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 MBOAT7Q96N66 472 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 QKIQ96PU8 341 aaKnown RBP eCLIP8.69□□□□□ -1.02
HPS4-209ENST00000466781 FAM105AQ9NUU6 356 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ARMCX1Q9P291 453 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 POLR3HQ9Y535 204 aaPredicted RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 KMOO15229 486 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CDH3P22223 829 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CCT3P49368 545 aaKnown RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 SP2Q02086 613 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 MYBPC3Q14896 1274 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 UNC5AQ6ZN44 842 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 AMIGO1Q86WK6 493 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 SETD6Q8TBK2 473 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 PRCCQ92733 491 aaPredicted RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 TMEM27Q9HBJ8 222 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 COPS7AQ9UBW8 275 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 TRPS1Q9UHF7 1281 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 FAM86C2PA6NEL3 165 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 LRRC72A6NJI9 287 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 DCLK1O15075 740 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CST1P01037 141 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 EPHX1P07099 455 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 TCF4P15884 667 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 FAUP35544 74 aaKnown RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 WASP42768 502 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CASP5P51878 434 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CHN2P52757 468 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 QPRTQ15274 297 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ZCCHC12Q6PEW1 402 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 TMPRSS11BQ86T26 416 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 DNASE1L2Q92874 299 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 C4BP0C0L5 1744 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ATXN2Q99700 1313 aaKnown RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 NPEPPSL1A6NEC2 478 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CLDN5O00501 218 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CLDN4O14493 209 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ZNF208O43345 1280 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 SCGNO76038 276 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 PROCP04070 461 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 LINC00032P0C843 101 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 GNSP15586 552 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 GRIA3P42263 894 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 SLC7A2P52569 658 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 RAB25P57735 213 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 MRPS22P82650 360 aaKnown RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 CAPSQ13938 189 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 PTCHD4Q6ZW05 846 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 CHST15Q7LFX5 561 aaPredicted RBP8.69□□□□□ -1.02
HPS4-209ENST00000466781 PIGZQ86VD9 579 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 DNAJB14Q8TBM8 379 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 RDH11Q8TC12 318 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 ARNTL2Q8WYA1 636 aa8.69□□□□□ -1.02
HPS4-209ENST00000466781 PIGKQ92643 395 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms