RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 NCBP2-AS2Q69YL0 99 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 ALKBH5Q6P6C2 394 aaKnown RBP19.1■□□□□ 0.65
COL9A3-206ENST00000466532 DOK6Q6PKX4 331 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 RFLNAQ6ZTI6 216 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 PIM3Q86V86 326 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 C17orf82Q86X59 251 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-206ENST00000466532 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL9A3-206ENST00000466532 SMIM14Q96QK8 99 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 SEMA6CQ9H3T2 930 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 RDH14Q9HBH5 336 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 CAPN11Q9UMQ6 739 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 AHCTF1Q8WYP5 2266 aa19.1■□□□□ 0.65
COL9A3-206ENST00000466532 PRAMEF33A0A0G2JMD5 474 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 PRAMEF10O60809 474 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 MAP3K6O95382 1288 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 SOD1P00441 154 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 LIPCP11150 499 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ALDH4A1P30038 563 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ADCY8P40145 1251 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ARSEP51690 589 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 EPHB1P54762 984 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 BIRC2Q13490 618 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 DPYSL3Q14195 570 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 PAFAH1B3Q15102 231 aaKnown RBP19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ATP13A4Q4VNC1 1196 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 TIGD7Q6NT04 549 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ZNF438Q7Z4V0 828 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ZNF564Q8TBZ8 553 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-206ENST00000466532 PATE1Q8WXA2 126 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 AP2M1Q96CW1 435 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 IQCDQ96DY2 449 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ABCG8Q9H221 673 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 LUC7L2Q9Y383 392 aaKnown RBP19.09■□□□□ 0.65
COL9A3-206ENST00000466532 TTLL3Q9Y4R7 772 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ST14Q9Y5Y6 855 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 ZNF462Q96JM2 2506 aa19.09■□□□□ 0.65
COL9A3-206ENST00000466532 A0A0J9YYE9 177 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 ZW10O43264 779 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 EFSO43281 561 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 ZIC2O95409 532 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-206ENST00000466532 TRBC1P01850 177 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 ZNF30P17039 623 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 DSC2Q02487 901 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 PEX6Q13608 980 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 NR1D2Q14995 579 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 C16orf72Q14CZ0 275 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 ANKRD20A8PQ5CZ79 823 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 ADAMTSL4Q6UY14 1074 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 USP53Q70EK8 1073 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 CPNE8Q86YQ8 564 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 NAGSQ8N159 534 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 KCTD6Q8NC69 237 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 MAML1Q92585 1016 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 USP7Q93009 1102 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 OR2M4Q96R27 311 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 NUDT22Q9BRQ3 303 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 CDH19Q9H159 772 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 TMEM98Q9Y2Y6 226 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 PLEKHM1Q9Y4G2 1056 aa19.08■□□□□ 0.64
COL9A3-206ENST00000466532 MATN3O15232 486 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 GYPCP04921 128 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 ACTR1BP42025 376 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 ACTR1AP61163 376 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 PTSQ03393 145 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 SRSF6Q13247 344 aaKnown RBP19.07■□□□□ 0.64
COL9A3-206ENST00000466532 IHHQ14623 411 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 IFI16Q16666 785 aaKnown RBP19.07■□□□□ 0.64
COL9A3-206ENST00000466532 ALG1LQ6GMV1 187 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 TRIM74Q86UV6 250 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 SCAMP4Q969E2 229 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 ZNF670Q9BS34 389 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 TDRD1Q9BXT4 1180 aaKnown RBP19.07■□□□□ 0.64
COL9A3-206ENST00000466532 HAUS2Q9NVX0 235 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 RBM22Q9NW64 420 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL9A3-206ENST00000466532 FOXJ2Q9P0K8 574 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 AKAP7Q9P0M2 348 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-206ENST00000466532 CTTNBP2NLQ9P2B4 639 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 CHKBQ9Y259 395 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 PIEZO2Q9H5I5 2752 aa19.07■□□□□ 0.64
COL9A3-206ENST00000466532 GOLGA6L19H0YKK7 550 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 PYGLP06737 847 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 CA4P22748 312 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 CES1P23141 567 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 CCNCP24863 283 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 GPR3P46089 330 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 PDK2Q15119 407 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 CLPPQ16740 277 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-206ENST00000466532 ZNF574Q6ZN55 896 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-206ENST00000466532 MARK2Q7KZI7 788 aaKnown RBP19.06■□□□□ 0.64
COL9A3-206ENST00000466532 ZNF765Q7L2R6 523 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 ZFAND4Q86XD8 727 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 RCBTB1Q8NDN9 531 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 LRRN4Q8WUT4 740 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 FATE1Q969F0 183 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 MED8Q96G25 268 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 SCARF2Q96GP6 870 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-206ENST00000466532 AGAP2Q99490 1192 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 SEPT10Q9P0V9 454 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 AMACRQ9UHK6 382 aa19.06■□□□□ 0.64
COL9A3-206ENST00000466532 DNPEPQ9ULA0 475 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms