RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 NDUFA10O95299 355 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 MPOP05164 745 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 CA4P22748 312 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 GPR1P46091 355 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 PDX1P52945 283 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 GALNT3Q14435 633 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 PRKD1Q15139 912 aaPredicted RBP21.7■■□□□ 1.06
LIME1-203ENST00000465591 SPA17Q15506 151 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 ODF2Q5BJF6 829 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 C11orf63Q6NUN7 778 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 OGFOD3Q6PK18 319 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 KATNAL2Q8IYT4 538 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 FAM46DQ8NEK8 389 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 HNRNPLLQ8WVV9 542 aaKnown RBP21.7■■□□□ 1.06
LIME1-203ENST00000465591 TADA1Q96BN2 335 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 RIOK2Q9BVS4 552 aaKnown RBP21.7■■□□□ 1.06
LIME1-203ENST00000465591 SUFUQ9UMX1 484 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 SLC17A4Q9Y2C5 497 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 DUSP10Q9Y6W6 482 aa21.7■■□□□ 1.06
LIME1-203ENST00000465591 PTPRQQ9UMZ3 2332 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 hCG_1818297A0A087WSY0 165 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 ANKRD66B4E2M5 251 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 PTPN3P26045 913 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 GNPDA1P46926 289 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 COL28A1Q2UY09 1125 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 DOK6Q6PKX4 331 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 ADAMTSL4Q6UY14 1074 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 ZNF765Q7L2R6 523 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 KDELC2Q7Z4H8 507 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 SPATA22Q8NHS9 363 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 GPBAR1Q8TDU6 330 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 EID2BQ96D98 161 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 ATXN7L3BQ96GX2 97 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 SPATS2LQ9NUQ6 558 aaKnown RBP21.69■■□□□ 1.06
LIME1-203ENST00000465591 LHX6Q9UPM6 363 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 TMEM98Q9Y2Y6 226 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 PLEKHM1Q9Y4G2 1056 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 ENTPD2Q9Y5L3 495 aa21.69■■□□□ 1.06
LIME1-203ENST00000465591 A0A087WV48 116 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 C1orf232A0A0U1RR37 186 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 PMS2P1A4D2B8 440 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 B4DGG1 531 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 NTN3O00634 580 aaPredicted RBP21.68■■□□□ 1.06
LIME1-203ENST00000465591 AK4P27144 223 aaPredicted RBP21.68■■□□□ 1.06
LIME1-203ENST00000465591 WASHC5Q12768 1159 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 TFDP2Q14188 446 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 TEX44Q53QW1 395 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 RBM44Q6ZP01 1051 aaKnown RBP21.68■■□□□ 1.06
LIME1-203ENST00000465591 NT5DC3Q86UY8 548 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 NLRP8Q86W28 1048 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 TMTC1Q8IUR5 882 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 ACRBPQ8NEB7 543 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 HAUS1Q96CS2 278 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 DCBLD2Q96PD2 775 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 HERPUD2Q9BSE4 406 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 MLPHQ9BV36 600 aaPredicted RBP21.68■■□□□ 1.06
LIME1-203ENST00000465591 LACRTQ9GZZ8 138 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 SLC25A51Q9H1U9 297 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 SYNDIG1Q9H7V2 258 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 GLOD4Q9HC38 313 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 SCN8AQ9UQD0 1980 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 CACNA1GO43497 2377 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 NBEAQ8NFP9 2946 aa21.68■■□□□ 1.06
LIME1-203ENST00000465591 A0A1W2PQM1 296 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 INPP4BO15327 924 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 MT-CYBP00156 380 aaPredicted RBP21.67■■□□□ 1.06
LIME1-203ENST00000465591 IVLP07476 585 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 PIRTP0C851 137 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 CD68P34810 354 aaPredicted RBP21.67■■□□□ 1.06
LIME1-203ENST00000465591 NR2C2P49116 596 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 SPINT3P49223 89 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 GABREP78334 506 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 CCL7P80098 99 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 PCSK7Q16549 785 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 TFDP3Q5H9I0 405 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 LYSMD3Q7Z3D4 306 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 DAAM2Q86T65 1068 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 NRSN1Q8IZ57 195 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 SCARF2Q96GP6 870 aaPredicted RBP21.67■■□□□ 1.06
LIME1-203ENST00000465591 CRELD1Q96HD1 420 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 COX14Q96I36 57 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 DPEP2Q9H4A9 486 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 DNPEPQ9ULA0 475 aa21.67■■□□□ 1.06
LIME1-203ENST00000465591 CNOT6Q9ULM6 557 aaKnown RBP21.67■■□□□ 1.06
LIME1-203ENST00000465591 PCYT1BQ9Y5K3 369 aaPredicted RBP21.67■■□□□ 1.06
LIME1-203ENST00000465591 FADS2P1A8MWK0 482 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 TCEA3O75764 348 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 ZRANB2O95218 330 aaKnown RBP eCLIP21.66■■□□□ 1.062e-8■■■■■ 38.5
LIME1-203ENST00000465591 ADCY8P40145 1251 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 EIF2S3P41091 472 aaKnown RBP21.66■■□□□ 1.06
LIME1-203ENST00000465591 HLTFQ14527 1009 aaKnown RBP eCLIP21.66■■□□□ 1.06
LIME1-203ENST00000465591 TBC1D25Q3MII6 688 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 C14orf28Q4W4Y0 310 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 CERCAMQ5T4B2 595 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 B3GNT8Q7Z7M8 397 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 ZC3H18Q86VM9 953 aaKnown RBP21.66■■□□□ 1.06
LIME1-203ENST00000465591 TMEM139Q8IV31 216 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 RCOR2Q8IZ40 523 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 EXD1Q8NHP7 514 aa21.66■■□□□ 1.06
LIME1-203ENST00000465591 TFB1MQ8WVM0 346 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms