RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 SNX1Q13596 522 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 BYSLQ13895 437 aaKnown RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 PTPRRQ15256 657 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 OASLQ15646 514 aaKnown RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 ZKSCAN8Q15776 578 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 LONRF2Q1L5Z9 754 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 BBS9Q3SYG4 887 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 TEX44Q53QW1 395 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 TMEM201Q5SNT2 666 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 CFAP58Q5T655 872 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 SEL1L3Q68CR1 1132 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 KIAA0895LQ68EN5 471 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 LAYNQ6UX15 382 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 SLC36A4Q6YBV0 504 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 KDM7AQ6ZMT4 941 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 C20orf204Q6ZNR8 217 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 LPCAT2Q7L5N7 544 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 PRUNE1Q86TP1 453 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 C11orf74Q86VG3 221 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 ZNF567Q8N184 647 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 ZCCHC9Q8N567 271 aaKnown RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 DTWD1Q8N5C7 304 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 FAM169BQ8N8A8 192 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 LPCAT1Q8NF37 534 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 OR2T34Q8NGX1 318 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 SPATA22Q8NHS9 363 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 SLC35B2Q8TB61 432 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 ARRDC2Q8TBH0 407 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 CCDC110Q8TBZ0 833 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 THAP3Q8WTV1 239 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 HTR3CQ8WXA8 447 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 KLK6Q92876 244 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 ECHDC3Q96DC8 303 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 OXNAD1Q96HP4 312 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 LRIG1Q96JA1 1093 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 CAPZA3Q96KX2 299 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 C16orf45Q96MC5 204 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 SMIM14Q96QK8 99 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 NAPGQ99747 312 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 GORASP1Q9BQQ3 440 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 TMEM121Q9BTD3 319 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 TDRD1Q9BXT4 1180 aaKnown RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 GBA3Q9H227 469 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 GLOD4Q9HC38 313 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 PREBQ9HCU5 417 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 FZD3Q9NPG1 666 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 PCDH12Q9NPG4 1184 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 KCND1Q9NSA2 647 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 AMACRQ9UHK6 382 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 RSPH14Q9UHP6 348 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 SNX12Q9UMY4 172 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 ZFR2Q9UPR6 939 aaKnown RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 POLR3KQ9Y2Y1 108 aaPredicted RBP6.49□□□□□ -1.37
SSBP1-205ENST00000465582 COQ6Q9Y2Z9 468 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 RAI2Q9Y5P3 530 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 FADS3Q9Y5Q0 445 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 DOCK9Q9BZ29 2069 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 PCDH15Q96QU1 1955 aa6.49□□□□□ -1.37
SSBP1-205ENST00000465582 ADAMTS9Q9P2N4 1935 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TMEM131Q92545 1883 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 hCG_2014768A0A024R1R8 64 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TBC1D3DA0A087WVF3 549 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TBC1D3IA0A087WXS9 549 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TBC1D3EA0A087X179 549 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TBC1D3KA0A087X1G2 549 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 A0A0U1RQS6 177 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 BCLAF3A2AJT9 711 aaKnown RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 FAM221BA6H8Z2 402 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TBC1D3FA6NER0 549 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 LRRC72A6NJI9 287 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 C10orf142B7Z368 130 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TBC1D3LB9A6J9 549 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 AGRPO00253 132 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 PGRMC1O00264 195 aaKnown RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 SLC7A4O43246 635 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 MTSS1O43312 755 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 HTRA2O43464 458 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 RNGTTO60942 597 aaKnown RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 PMPCBO75439 489 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 PCDH8O95206 1070 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 PGLSO95336 258 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 IVLP07476 585 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 PDHA1P08559 390 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 SERPINF2P08697 491 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 ALPIP09923 528 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 TBC1D3HP0C7X1 549 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 PRLRP16471 622 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 CTPS1P17812 591 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 XPAP23025 273 aaPredicted RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 MMP12P39900 470 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 MPLP40238 635 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 HNRNPH2P55795 449 aaKnown RBP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 NSUN2Q08J23 767 aaKnown RBP eCLIP6.48□□□□□ -1.37
SSBP1-205ENST00000465582 RALGDSQ12967 914 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 OLIG2Q13516 323 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 FGL2Q14314 439 aa6.48□□□□□ -1.37
SSBP1-205ENST00000465582 GALNT3Q14435 633 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms