RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SLC6A18Q96N87 628 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 AGAP3Q96P47 875 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SMC6Q96SB8 1091 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 EPN3Q9H201 632 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 CASS4Q9NQ75 786 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 INTS9Q9NV88 658 aaKnown RBP13.9□□□□□ -0.18
HDAC6-215ENST00000465457 IPO11Q9UI26 975 aaKnown RBP13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SLC27A6Q9Y2P4 619 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 TTLL3Q9Y4R7 772 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 BSNQ9UPA5 3926 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 B8ZZF3 427 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 SLC28A2O43868 658 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 TSPAN3O60637 253 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 AVILO75366 819 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 FAM155BO75949 473 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 LDOC1O95751 146 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-215ENST00000465457 SEMA4FO95754 770 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 IGHV4-34P06331 123 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 POLBP06746 335 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 CHN1P15882 459 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 ETFBP38117 255 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 PAPOLAP51003 745 aaKnown RBP13.89□□□□□ -0.19
HDAC6-215ENST00000465457 KCNC4Q03721 635 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 IL10RBQ08334 325 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 CDH17Q12864 832 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 TBC1D25Q3MII6 688 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 TMCO4Q5TGY1 634 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 UNC5AQ6ZN44 842 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 CHST9Q7L1S5 443 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 IGDCC3Q8IVU1 814 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 TP53INP2Q8IXH6 220 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 SRRM1Q8IYB3 904 aaKnown RBP13.89□□□□□ -0.19
HDAC6-215ENST00000465457 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 ZNF599Q96NL3 588 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 TRIM4Q9C037 500 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 CIPCQ9C0C6 399 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 IL22Q9GZX6 179 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 SP110Q9HB58 689 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 GLOD4Q9HC38 313 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 MPP6Q9NZW5 540 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 CTNNAL1Q9UBT7 734 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 TBK1Q9UHD2 729 aa13.89□□□□□ -0.19
HDAC6-215ENST00000465457 COL27A1Q8IZC6 1860 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-215ENST00000465457 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 FAM47DPA6NHR8 397 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 FAM159BA6NKW6 160 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 WNT9AO14904 365 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 CLDN11O75508 207 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 KRT38O76015 456 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 STC2O76061 302 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 HMBSP08397 361 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 CD27P26842 260 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 CD68P34810 354 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-215ENST00000465457 CDH4P55283 916 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 POLD3Q15054 466 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-215ENST00000465457 KBTBD12Q3ZCT8 623 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 CASC4Q6P4E1 433 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 SERPINA13PQ6UXR4 307 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 BBS5Q8N3I7 341 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 DNAAF3Q8N9W5 541 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 OR2T3Q8NH03 318 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 SAP25Q8TEE9 199 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 PTCD2Q8WV60 388 aaKnown RBP13.88□□□□□ -0.19
HDAC6-215ENST00000465457 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 TTC9Q92623 222 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 CEP41Q9BYV8 373 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 PCED1AQ9H1Q7 454 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 MAGEH1Q9H213 219 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 TRABDQ9H4I3 376 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 EBF2Q9HAK2 575 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 ZNF212Q9UDV6 495 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 STOML2Q9UJZ1 356 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 LSM7Q9UK45 103 aaKnown RBP13.88□□□□□ -0.19
HDAC6-215ENST00000465457 PCDHB1Q9Y5F3 818 aa13.88□□□□□ -0.19
HDAC6-215ENST00000465457 TDRD6O60522 2096 aaKnown RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 KIF26BQ2KJY2 2108 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 TEX15Q9BXT5 2789 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 TYW5A2RUC4 315 aaKnown RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 GMNCA6NCL1 334 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 WISP1O95388 367 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 FAM107AO95990 144 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 OR1E1P30953 314 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 MPP3Q13368 585 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 INAVAQ3KP66 663 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 ADGRF1Q5T601 910 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 ZNF783Q6ZMS7 281 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 MARK2Q7KZI7 788 aaKnown RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 SETD3Q86TU7 594 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 LGI2Q8N0V4 545 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 AGGF1Q8N302 714 aaeCLIP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 TEX26Q8N6G2 289 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 NETO2Q8NC67 525 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 CYB5D2Q8WUJ1 264 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 DYDC1Q8WWB3 177 aa13.87□□□□□ -0.19
HDAC6-215ENST00000465457 ELF4Q99607 663 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 MLPHQ9BV36 600 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-215ENST00000465457 NSRP1Q9H0G5 558 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms