RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CCDC160A6NGH7 325 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 LRRC14BA6NHZ5 514 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 SUPT3HB4E1H0 165 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 H0YJX3 145 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 H3BMM5 538 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 PPP6CO00743 305 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 ANGPT2O15123 496 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 SUPT3HO75486 399 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 CRCPO75575 148 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 RHOBTB1O94844 696 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 IGLV3-27P01718 113 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 MTHFD2P13995 350 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 RING1Q06587 406 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 RPS6KA2Q15349 733 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 SLC5A9Q2M3M2 681 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 C8orf82Q6P1X6 216 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-204ENST00000465425 PCSK9Q8NBP7 692 aaKnown RBP18.28■□□□□ 0.52
SYNE4-204ENST00000465425 STAG3L4Q8TBR4 150 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TUBGCP3Q96CW5 907 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 NSUN5Q96P11 429 aaKnown RBP18.28■□□□□ 0.52
SYNE4-204ENST00000465425 IL1RL2Q9HB29 575 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 INTS10Q9NVR2 710 aaKnown RBP18.28■□□□□ 0.52
SYNE4-204ENST00000465425 TAS2R13Q9NYV9 303 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 PTGDR2Q9Y5Y4 395 aa18.28■□□□□ 0.52
SYNE4-204ENST00000465425 CLASP2O75122 1294 aaKnown RBP18.27■□□□□ 0.52
SYNE4-204ENST00000465425 NDST3O95803 873 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 TACR2P21452 398 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 GRIA3P42263 894 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 FOXA1P55317 472 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 MAP7Q14244 749 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.27■□□□□ 0.52
SYNE4-204ENST00000465425 MTX3Q5HYI7 312 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 LGI2Q8N0V4 545 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 CFAP52Q8N1V2 620 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 NMD3Q96D46 503 aaKnown RBP18.27■□□□□ 0.52
SYNE4-204ENST00000465425 RMDN1Q96DB5 314 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 CDKN2AIPNLQ96HQ2 116 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 ZNF599Q96NL3 588 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 ATOH8Q96SQ7 321 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 GRIP2Q9C0E4 1043 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 RIMKLBQ9ULI2 386 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 FAM50BQ9Y247 325 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 NDUFAF1Q9Y375 327 aa18.27■□□□□ 0.52
SYNE4-204ENST00000465425 BRCA2P51587 3418 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 A0A0D9SEW6 157 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 OR6C75A6NL08 312 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 TLR5O60602 858 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.51
SYNE4-204ENST00000465425 TYSND1Q2T9J0 566 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 KANK2Q63ZY3 851 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 NADSYN1Q6IA69 706 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 RGMBQ6NW40 437 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 FBXO39Q8N4B4 442 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 OR2T34Q8NGX1 318 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 OR2T3Q8NH03 318 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 SLCO4A1Q96BD0 722 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 MYEOVQ96EZ4 313 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 DUS3LQ96G46 650 aaKnown RBP18.27■□□□□ 0.51
SYNE4-204ENST00000465425 ZNF597Q96LX8 424 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 HOPXQ9BPY8 73 aaPredicted RBP18.27■□□□□ 0.51
SYNE4-204ENST00000465425 OSBPL11Q9BXB4 747 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 CCSER2Q9H7U1 834 aa18.27■□□□□ 0.51
SYNE4-204ENST00000465425 KERAO60938 352 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 CKBP12277 381 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 EEF1DP29692 281 aaKnown RBP18.26■□□□□ 0.51
SYNE4-204ENST00000465425 FMO4P31512 558 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 KPNA1P52294 538 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-204ENST00000465425 MTA1Q13330 715 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 IKBKEQ14164 716 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 VPS26BQ4G0F5 336 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 NADK2Q4G0N4 442 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 CCSAPQ6IQ19 270 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-204ENST00000465425 PRMT9Q6P2P2 845 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 RBM44Q6ZP01 1051 aaKnown RBP18.26■□□□□ 0.51
SYNE4-204ENST00000465425 AMIGO2Q86SJ2 522 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 RETREG3Q86VR2 466 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 KIAA1191Q96A73 305 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 B3GALT6Q96L58 329 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 KCNA7Q96RP8 456 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 CIB1Q99828 191 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 NOL11Q9H8H0 719 aaKnown RBP18.26■□□□□ 0.51
SYNE4-204ENST00000465425 PDFQ9HBH1 243 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 GIMAP2Q9UG22 337 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 ZNF839A8K0R7 811 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 AKAP10O43572 662 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 LINC00032P0C843 101 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 PRSS56P0CW18 603 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 HGFP14210 728 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 LBPP18428 481 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 CLCQ05315 142 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 RAD51Q06609 339 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 LCP2Q13094 533 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 GLT6D1Q7Z4J2 308 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 DDI1Q8WTU0 396 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 CINPQ9BW66 212 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-204ENST00000465425 TRIM15Q9C019 465 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 SEPT3Q9UH03 358 aa18.26■□□□□ 0.51
SYNE4-204ENST00000465425 CNOT6Q9ULM6 557 aaKnown RBP18.26■□□□□ 0.51
SYNE4-204ENST00000465425 C7orf72A4D263 438 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms