RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SH3BP5O60239 455 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 AP2A1O95782 977 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 SLC4A1P02730 911 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 JUNDP17535 347 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 CSRP1P21291 193 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 TEAD1P28347 426 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 EPHA8P29322 1005 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 RPL22P35268 128 aaKnown RBP14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 HMGCLP35914 325 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 KIAA1024LP59773 190 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 HNRNPKP61978 463 aaKnown RBP eCLIP14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 CYP1B1Q16678 543 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 DENND5AQ6IQ26 1287 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 GLT6D1Q7Z4J2 308 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 PIP4P1Q86T03 277 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 HEATR4Q86WZ0 1026 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 GATAD2AQ86YP4 633 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 RHBDD1Q8TEB9 315 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 WDR92Q96MX6 357 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 AGAP2Q99490 1192 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 LGR4Q9BXB1 951 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 CDH19Q9H159 772 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 SLC32A1Q9H598 525 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 RAB6BQ9NRW1 208 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 PHPT1Q9NRX4 125 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 RAD18Q9NS91 495 aa14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 FEZ2Q9UHY8 353 aaPredicted RBP14.46□□□□□ -0.09
SQSTM1-205ENST00000464493 GOLGA6L10A0A0M3HER8 536 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 TMEM202A6NGA9 273 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 E7EVH7 732 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 H3BM21 787 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 SDC3O75056 442 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 PIAS2O75928 621 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 SOD1P00441 154 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 MYCLP1P12525 358 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 NME1P15531 152 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 KELP23276 732 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 DGKAP23743 735 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 COILP38432 576 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 LMAN1P49257 510 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 BLKP51451 505 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 ETF1P62495 437 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 CDK3Q00526 305 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 PPARDQ03181 441 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 HENMT1Q5T8I9 393 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 TTC27Q6P3X3 843 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 ADAMTSL4Q6UY14 1074 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 LINC00523Q86TU6 105 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 NAXDQ8IW45 347 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 SLC25A45Q8N413 288 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 TTC30BQ8N4P2 665 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 GPR26Q8NDV2 337 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 DEFB124Q8NES8 71 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 OR56A4Q8NGH8 313 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 BRSK1Q8TDC3 778 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 BTN2A2Q8WVV5 523 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 TSACCQ96A04 125 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 CAPZA3Q96KX2 299 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 CAMK1GQ96NX5 476 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 BPIFA1Q9NP55 256 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 KLQ9UEF7 1012 aa14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 PNMA8BQ9ULN7 279 aaPredicted RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 CNOT1A5YKK6 2376 aaKnown RBP14.45□□□□□ -0.1
SQSTM1-205ENST00000464493 PCNX2A6NKB5 2137 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 C2orf81A6NN90 581 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 TNFRSF10CO14798 259 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 FANCGO15287 622 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 BPIP17213 487 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 CASQ1P31415 396 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 GRK6P43250 576 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 HK3P52790 923 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 DCDC1P59894 354 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 SRP54P61011 504 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 MSLNQ13421 630 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 SEMA5AQ13591 1074 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 TAF1AQ15573 450 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 ALG11Q2TAA5 492 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 INAVAQ3KP66 663 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 HS1BP3Q53T59 392 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 ZDHHC20Q5W0Z9 365 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 ALS2CLQ60I27 953 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 CCDC137Q6PK04 289 aaKnown RBP14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 KANSL1Q7Z3B3 1105 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 RD3Q7Z3Z2 195 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 CREG2Q8IUH2 290 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 HID1Q8IV36 788 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 PHACTR4Q8IZ21 702 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 HIC2Q96JB3 615 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 SPATA16Q9BXB7 569 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 SLC13A1Q9BZW2 595 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 CAAP1Q9H8G2 361 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 UCKL1Q9NWZ5 548 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 IL17CQ9P0M4 197 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 NFKBIL1Q9UBC1 381 aaPredicted RBP14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 PCOLCE2Q9UKZ9 415 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 BTBD3Q9Y2F9 522 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 PKP3Q9Y446 797 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 ARL5AQ9Y689 179 aa14.44□□□□□ -0.1
SQSTM1-205ENST00000464493 NEMP2A6NFY4 417 aa14.43□□□□□ -0.1
SQSTM1-205ENST00000464493 FADS2P1A8MWK0 482 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms