RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SYT13Q7L8C5 426 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 TMC8Q8IU68 726 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 TMEM139Q8IV31 216 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 FAM114A1Q8IWE2 563 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 CHCHD4Q8N4Q1 142 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 TC2NQ8N9U0 490 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 Q8NA96 180 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 BEST2Q8NFU1 509 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 KBTBD7Q8WVZ9 684 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 FAXDC2Q96IV6 333 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 FNBP1Q96RU3 617 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 PNKPQ96T60 521 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 DPEP3Q9H4B8 488 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 SLC32A1Q9H598 525 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 ASB7Q9H672 318 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 FBRSL1Q9HCM7 1045 aaKnown RBP3.78□□□□□ -1.81
SCFD1-204ENST00000463622 TDP1Q9NUW8 608 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 RAB20Q9NX57 234 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 DKK4Q9UBT3 224 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 AFF4Q9UHB7 1163 aaKnown RBP3.78□□□□□ -1.81
SCFD1-204ENST00000463622 MCM8Q9UJA3 840 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 FBXL5Q9UKA1 691 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 L1RE1Q9UN81 338 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 AGAP1Q9UPQ3 857 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 ATP8A1Q9Y2Q0 1164 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 C2CD2Q9Y426 696 aa3.78□□□□□ -1.81
SCFD1-204ENST00000463622 SCN1AP35498 2009 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 NAV2Q8IVL1 2488 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 WDFY3Q8IZQ1 3526 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 KALRNO60229 2985 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 LRRC53A6NM62 1247 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 H7C4K7 107 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 FOXN3O00409 490 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-204ENST00000463622 PODXLO00592 558 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 XPOTO43592 962 aaKnown RBP3.77□□□□□ -1.81
SCFD1-204ENST00000463622 ATP2C2O75185 946 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 IL18RAPO95256 599 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 VNN2O95498 520 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 APBB3O95704 486 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 OR4Q2P0C623 313 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 SKILP12757 684 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 MYL4P12829 197 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 UCHL3P15374 230 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 LMO2P25791 158 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 ABCD1P33897 745 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 C21orf58P58505 322 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 CTXN1P60606 82 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 FAM193AP78312 1265 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 BLOC1S1P78537 153 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 TWF1Q12792 350 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 GRSF1Q12849 480 aaKnown RBP eCLIP3.77□□□□□ -1.81
SCFD1-204ENST00000463622 LMAN2Q12907 356 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 PCBP2Q15366 365 aaKnown RBP eCLIP3.77□□□□□ -1.811e-6■■■□□ 18.2
SCFD1-204ENST00000463622 EXOC3L4Q17RC7 722 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 SOWAHAQ2M3V2 549 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 CD300EQ496F6 205 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-204ENST00000463622 FBXO43Q4G163 708 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 FLYWCH1Q4VC44 716 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 CCDC186Q7Z3E2 898 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 YAF2Q8IY57 180 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 FAM98AQ8NCA5 519 aaKnown RBP3.77□□□□□ -1.81
SCFD1-204ENST00000463622 STKLD1Q8NE28 680 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 FBXL13Q8NEE6 735 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 OR10T2Q8NGX3 314 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 SLC20A1Q8WUM9 679 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 ADAMTS14Q8WXS8 1223 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 TMEM125Q96AQ2 219 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 HPDLQ96IR7 371 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 ZFYVE19Q96K21 471 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 UROC1Q96N76 676 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 PPP1R9BQ96SB3 815 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 CHP1Q99653 195 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 SYT11Q9BT88 431 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 ELOVL4Q9GZR5 314 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 PLEKHA5Q9HAU0 1116 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 ASAH2Q9NR71 780 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 TMEM30AQ9NV96 361 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 FOXJ2Q9P0K8 574 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 DNAJC12Q9UKB3 198 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 TRHDEQ9UKU6 1024 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 UBQLN1Q9UMX0 589 aaKnown RBP3.77□□□□□ -1.81
SCFD1-204ENST00000463622 TFR2Q9UP52 801 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 CDYLQ9Y232 598 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 PRKAB1Q9Y478 270 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 MIA3Q5JRA6 1907 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 ITIH6Q6UXX5 1313 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 CITO14578 2027 aa3.77□□□□□ -1.81
SCFD1-204ENST00000463622 UNC79Q9P2D8 2635 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 MTCL1Q9Y4B5 1905 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 A0A087WV48 116 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 GTPBP10A4D1E9 387 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 F8VZ95 297 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PMM2O15305 246 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 C1QL1O75973 258 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 GFPT2O94808 682 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 OAZ2O95190 189 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 FGFR1OPO95684 399 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 EGFP01133 1207 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TNNC2P02585 160 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CD59P13987 128 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms