RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 BZW1Q7L1Q6 419 aaKnown RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 TAF8Q7Z7C8 310 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 CPNE8Q86YQ8 564 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 RHOT1Q8IXI2 618 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 CCNYQ8ND76 341 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 WDR36Q8NI36 951 aaKnown RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 CCDC97Q96F63 343 aaPredicted RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 GFM1Q96RP9 751 aaKnown RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 LGR4Q9BXB1 951 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 MAK16Q9BXY0 300 aaKnown RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 GSDMCQ9BYG8 508 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 TMEM168Q9H0V1 697 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 PCDH9Q9HC56 1237 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 CYP4F12Q9HCS2 524 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 ASCL3Q9NQ33 180 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 SPTLC3Q9NUV7 552 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
RTCB-202ENST00000463455 ARHGEF17Q96PE2 2063 aaPredicted RBP11.87□□□□□ -0.51
RTCB-202ENST00000463455 ATRXP46100 2492 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 CCDC187A0A096LP49 1063 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 A8MX80 341 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 D6RAR5 112 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 PSTPIP1O43586 416 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 NOBOXO60393 691 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 PRLP01236 227 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 MPOP05164 745 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 CEACAM5P06731 702 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 RBMS1P29558 406 aaKnown RBP11.86□□□□□ -0.51
RTCB-202ENST00000463455 CCKBRP32239 447 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 GPR1P46091 355 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 UCNP55089 124 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 DSC2Q02487 901 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 PTSQ03393 145 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 LRP8Q14114 963 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 HLTFQ14527 1009 aaKnown RBP eCLIP11.86□□□□□ -0.51
RTCB-202ENST00000463455 NR1D2Q14995 579 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 C14orf28Q4W4Y0 310 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 ODF2Q5BJF6 829 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 TSPAN33Q86UF1 283 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 C17orf82Q86X59 251 aaPredicted RBP11.86□□□□□ -0.51
RTCB-202ENST00000463455 CCDC170Q8IYT3 715 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 PELI3Q8N2H9 469 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 ARL14Q8N4G2 192 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 FAM46DQ8NEK8 389 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 CCDC74AQ96AQ1 378 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 TMEM159Q96B96 161 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 AP2M1Q96CW1 435 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 CALR3Q96L12 384 aaKnown RBP11.86□□□□□ -0.51
RTCB-202ENST00000463455 TMEM74Q96NL1 305 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 SLC46A1Q96NT5 459 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 OLFM3Q96PB7 478 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 SRPK1Q96SB4 655 aaKnown RBP11.86□□□□□ -0.51
RTCB-202ENST00000463455 ADGRE3Q9BY15 652 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 DPH1Q9BZG8 443 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 STRADBQ9C0K7 418 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 CDH19Q9H159 772 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 CARS2Q9HA77 564 aaKnown RBP11.86□□□□□ -0.51
RTCB-202ENST00000463455 LUC7LQ9NQ29 371 aaKnown RBP11.86□□□□□ -0.51
RTCB-202ENST00000463455 SIRPGQ9P1W8 387 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 IGSF10Q6WRI0 2623 aa11.86□□□□□ -0.51
RTCB-202ENST00000463455 A0A0A6YYK5 440 aaPredicted RBP11.85□□□□□ -0.51
RTCB-202ENST00000463455 ANKRD66B4E2M5 251 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 MTSS1O43312 755 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 MAP3K6O95382 1288 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 LCA5LO95447 670 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 SOD1P00441 154 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 CTPS1P17812 591 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 PDX1P52945 283 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 SKOR1P84550 965 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 NIPAL4Q0D2K0 466 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 KCTD16Q68DU8 428 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 ZNF438Q7Z4V0 828 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 CCNJLQ8IV13 435 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 LSM14AQ8ND56 463 aaKnown RBP11.85□□□□□ -0.51
RTCB-202ENST00000463455 EXD1Q8NHP7 514 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 CCHCR1Q8TD31 782 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 ATXN7L3BQ96GX2 97 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 LGMNQ99538 433 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 TRIM5Q9C035 493 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 ABCG8Q9H221 673 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 LRRN3Q9H3W5 708 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 DPEP2Q9H4A9 486 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 MRPL40Q9NQ50 206 aaKnown RBP11.85□□□□□ -0.51
RTCB-202ENST00000463455 RAD18Q9NS91 495 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 VPS18Q9P253 973 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 NFKBIL1Q9UBC1 381 aaPredicted RBP11.85□□□□□ -0.51
RTCB-202ENST00000463455 SUFUQ9UMX1 484 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 SATB2Q9UPW6 733 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 CHKBQ9Y259 395 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 TTLL3Q9Y4R7 772 aa11.85□□□□□ -0.51
RTCB-202ENST00000463455 UNC13CQ8NB66 2214 aa11.84□□□□□ -0.51
RTCB-202ENST00000463455 CDRT15L2A8MXV6 281 aa11.84□□□□□ -0.51
RTCB-202ENST00000463455 KCNK1O00180 336 aa11.84□□□□□ -0.51
RTCB-202ENST00000463455 SPOPO43791 374 aa11.84□□□□□ -0.51
RTCB-202ENST00000463455 JCHAINP01591 159 aa11.84□□□□□ -0.51
RTCB-202ENST00000463455 KRT1P04264 644 aa11.84□□□□□ -0.51
RTCB-202ENST00000463455 RPLP0P05388 317 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms