RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KBTBD12Q3ZCT8 623 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 TMEM31Q5JXX7 168 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 HENMT1Q5T8I9 393 aaKnown RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 PDPK2PQ6A1A2 396 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 NEPROQ6NW34 567 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 ZNF765Q7L2R6 523 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 KCNMB4Q86W47 210 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 HORMAD1Q86X24 394 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 CNTN4Q8IWV2 1026 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 PGBD3Q8N328 593 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 UHMK1Q8TAS1 419 aaKnown RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 GANCQ8TET4 914 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 ASB12Q8WXK4 309 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 MCMBPQ9BTE3 642 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 TMEM109Q9BVC6 243 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 ABCG8Q9H221 673 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 RAD18Q9NS91 495 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 C20orf96Q9NUD7 363 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 PKD2L2Q9NZM6 624 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
COL6A1-202ENST00000463060 MARCH4Q9P2E8 410 aaPredicted RBP14.3□□□□□ -0.12
COL6A1-202ENST00000463060 TRPM6Q9BX84 2022 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 IGHV1OR15-9A0A0B4J2B8 117 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 NEMP1O14524 444 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 MAP2K7O14733 419 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 RNGTTO60942 597 aaKnown RBP14.29□□□□□ -0.12
COL6A1-202ENST00000463060 PIAS1O75925 651 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 PCDH8O95206 1070 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 SLC4A1P02730 911 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 OXTRP30559 389 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 STX2P32856 288 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 CA5AP35218 305 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 SPAM1P38567 509 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 PXNP49023 591 aaPredicted RBP14.29□□□□□ -0.12
COL6A1-202ENST00000463060 RPS21P63220 83 aaKnown RBP14.29□□□□□ -0.12
COL6A1-202ENST00000463060 DPTQ07507 201 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 STAT4Q14765 748 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 ACOX1Q15067 660 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 ZNF284Q2VY69 593 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 HSP90AA5PQ58FG0 334 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 ZDHHC20Q5W0Z9 365 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 SEL1L3Q68CR1 1132 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 KIAA1161Q6NSJ0 714 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 FAM124AQ86V42 546 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 TRIM69Q86WT6 500 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 LMNTD2Q8IXW0 634 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 PIANPQ8IYJ0 282 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 FRMD1Q8N878 549 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 OR2T34Q8NGX1 318 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 OR4L1Q8NH43 312 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 CXorf40AQ8TE69 158 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 SCAMP4Q969E2 229 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 CYTH2Q99418 400 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 AGAP2Q99490 1192 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 DHRS4Q9BTZ2 278 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 TPSD1Q9BZJ3 242 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 BTBD1Q9H0C5 482 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 FAM83DQ9H4H8 585 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 EPHX3Q9H6B9 360 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 KCTD5Q9NXV2 234 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 VPS18Q9P253 973 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 BCCIPQ9P287 314 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL6A1-202ENST00000463060 FETUBQ9UGM5 382 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 APPL1Q9UKG1 709 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 TMPRSS11EQ9UL52 423 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 COQ6Q9Y2Z9 468 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 PLXNA2O75051 1894 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 PLXND1Q9Y4D7 1925 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 DOCK9Q9BZ29 2069 aa14.29□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3DA0A087WVF3 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3IA0A087WXS9 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3EA0A087X179 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3KA0A087X1G2 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 A0A1W2PQU0 124 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3FA6NER0 549 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3LB9A6J9 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 GOLGA8KD6RF30 607 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 GOLGA8TH3BQL2 631 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 CD3EAPO15446 510 aaKnown RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 LATO43561 262 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 SOD1P00441 154 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3HP0C7X1 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 PRSS56P0CW18 603 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 GABRB3P28472 473 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 CD6P30203 668 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 MC4RP32245 332 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 CDKN1CP49918 316 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 PRAMEP78395 509 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 DMWDQ09019 674 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 SEMA3AQ14563 771 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 CHRNA6Q15825 494 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3GQ6DHY5 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3CQ6IPX1 549 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 AFTPHQ6ULP2 937 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 MARK2Q7KZI7 788 aaKnown RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 HDXQ7Z353 690 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 PTAR1Q7Z6K3 402 aaPredicted RBP14.28□□□□□ -0.12
COL6A1-202ENST00000463060 C1orf210Q8IVY1 113 aa14.28□□□□□ -0.12
COL6A1-202ENST00000463060 TBC1D3Q8IZP1 549 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms