RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 A0A1W2PQ67 120 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 ATMINO43313 823 aaPredicted RBP13.15□□□□□ -0.3
SRRT-206ENST00000460194 LRCH4O75427 683 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 PDHA1P08559 390 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 MPSTP25325 297 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 PSMA2P25787 234 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 IL1R2P27930 398 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 ATP1A2P50993 1020 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 GPLD1P80108 840 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 FOXK1P85037 733 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 PTSQ03393 145 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 SKIDA1Q1XH10 827 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 ANKS6Q68DC2 871 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 TIPARPQ7Z3E1 657 aaKnown RBP13.15□□□□□ -0.3
SRRT-206ENST00000460194 NLRP8Q86W28 1048 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 PTRH1Q86Y79 214 aaKnown RBP13.15□□□□□ -0.3
SRRT-206ENST00000460194 SFRP1Q8N474 314 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 RTP4Q96DX8 246 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 COX14Q96I36 57 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 SMIM14Q96QK8 99 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 DPYSL5Q9BPU6 564 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 SLC39A1Q9NY26 324 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 AKAP7Q9P0M2 348 aaPredicted RBP13.15□□□□□ -0.3
SRRT-206ENST00000460194 ANKMY1Q9P2S6 941 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 PHTF1Q9UMS5 762 aa13.15□□□□□ -0.3
SRRT-206ENST00000460194 LOC101059948A0A1B0GTJ6 334 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 A6NCN8 305 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 NKX2-8O15522 239 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 DUX1O43812 170 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 RAD1O60671 282 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 PGLSO95336 258 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 CPP00450 1065 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 TCF4P15884 667 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 HSPA9P38646 679 aaKnown RBP13.14□□□□□ -0.31
SRRT-206ENST00000460194 CASRP41180 1078 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 ZNF135P52742 658 aaPredicted RBP13.14□□□□□ -0.31
SRRT-206ENST00000460194 MC2RQ01718 297 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 UBAP2LQ14157 1087 aaKnown RBP13.14□□□□□ -0.31
SRRT-206ENST00000460194 NCAPHQ15003 741 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 DPYSL2Q16555 572 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 PPP6R3Q5H9R7 873 aaPredicted RBP13.14□□□□□ -0.31
SRRT-206ENST00000460194 ADAMTSL4Q6UY14 1074 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 POLNQ7Z5Q5 900 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 LZTR1Q8N653 840 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 IL22RA1Q8N6P7 574 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 AGAP2Q99490 1192 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 ASPSCR1Q9BZE9 553 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 ABCG8Q9H221 673 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 SUDS3Q9H7L9 328 aaPredicted RBP13.14□□□□□ -0.31
SRRT-206ENST00000460194 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
SRRT-206ENST00000460194 TMEM98Q9Y2Y6 226 aa13.14□□□□□ -0.31
SRRT-206ENST00000460194 EFCAB7A8K855 629 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 ZW10O43264 779 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 DAPK3O43293 454 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 DNAJC6O75061 913 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 FERP16591 822 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 AMPD1P23109 780 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 CSTF2P33240 577 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRRT-206ENST00000460194 ACTR1BP42025 376 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 ACTR1AP61163 376 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 MAXP61244 160 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 RALGPS1Q5JS13 557 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 DCAF12Q5T6F0 453 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 DENND2CQ68D51 928 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 RAET1GQ6H3X3 334 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 WDR74Q6RFH5 385 aaPredicted RBP13.13□□□□□ -0.31
SRRT-206ENST00000460194 TRIM74Q86UV6 250 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 ZNF761Q86XN6 746 aaPredicted RBP13.13□□□□□ -0.31
SRRT-206ENST00000460194 TEX26Q8N6G2 289 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 SLC37A2Q8TED4 501 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 SCAMP4Q969E2 229 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 OR2M4Q96R27 311 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 WDR24Q96S15 920 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 FBXO8Q9NRD0 319 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 KCNK4Q9NYG8 393 aa13.13□□□□□ -0.31
SRRT-206ENST00000460194 CNOT6Q9ULM6 557 aaKnown RBP13.13□□□□□ -0.31
SRRT-206ENST00000460194 TMEM184BQ9Y519 407 aaPredicted RBP13.13□□□□□ -0.31
SRRT-206ENST00000460194 SPTAN1Q13813 2472 aaKnown RBP13.12□□□□□ -0.31
SRRT-206ENST00000460194 ZNF891A8MT65 544 aaPredicted RBP13.12□□□□□ -0.31
SRRT-206ENST00000460194 CAPN5O15484 640 aaPredicted RBP13.12□□□□□ -0.31
SRRT-206ENST00000460194 DLGAP3O95886 979 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 PRLP01236 227 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 CYP2A6P11509 494 aaPredicted RBP13.12□□□□□ -0.31
SRRT-206ENST00000460194 IL4RP24394 825 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 OAS2P29728 719 aaKnown RBP13.12□□□□□ -0.31
SRRT-206ENST00000460194 PCK1P35558 622 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 CCR10P46092 362 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 RAB15P59190 212 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 UBXN1Q04323 297 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 PEX6Q13608 980 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 CRTC2Q53ET0 693 aaPredicted RBP13.12□□□□□ -0.31
SRRT-206ENST00000460194 E4F1Q66K89 784 aaPredicted RBP13.12□□□□□ -0.31
SRRT-206ENST00000460194 LRRC66Q68CR7 880 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 TXNRD3NBQ6F5E7 133 aa13.12□□□□□ -0.31
SRRT-206ENST00000460194 ALG1LQ6GMV1 187 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms