RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TAAR2Q9P1P5 351 aa22.71■■□□□ 1.23
PTPN4-207ENST00000460162 ACSL6Q9UKU0 697 aa22.71■■□□□ 1.23
PTPN4-207ENST00000460162 ZFC3H1O60293 1989 aaKnown RBP22.7■■□□□ 1.23
PTPN4-207ENST00000460162 C1QL1O75973 258 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 MAP3K6O95382 1288 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 SOD1P00441 154 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 FUCA1P04066 466 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 TAS2R40P59535 323 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 ZFP36L1Q07352 338 aaKnown RBP22.7■■□□□ 1.22
PTPN4-207ENST00000460162 C19orf57Q0VDD7 668 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 CLN3Q13286 438 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 NR1D2Q14995 579 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 PTPRRQ15256 657 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 ZSCAN23Q3MJ62 389 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 MAP9Q49MG5 647 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 NLRP8Q86W28 1048 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 RAVER1Q8IY67 606 aaKnown RBP22.7■■□□□ 1.22
PTPN4-207ENST00000460162 DNAJC7Q99615 494 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 PACSIN1Q9BY11 444 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 SPATS2LQ9NUQ6 558 aaKnown RBP22.7■■□□□ 1.22
PTPN4-207ENST00000460162 RBM22Q9NW64 420 aaKnown RBP eCLIP22.7■■□□□ 1.22
PTPN4-207ENST00000460162 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.7■■□□□ 1.22
PTPN4-207ENST00000460162 ATXN7L1Q9ULK2 861 aaPredicted RBP22.7■■□□□ 1.22
PTPN4-207ENST00000460162 LOXL2Q9Y4K0 774 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 TTLL3Q9Y4R7 772 aa22.7■■□□□ 1.22
PTPN4-207ENST00000460162 SSU72P8A0A1W2PR75 194 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 ZW10O43264 779 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 PRB1P04280 392 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 HLA-DQB2P05538 268 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 JMJD7P0C870 316 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 MAZP56270 477 aaKnown RBP22.69■■□□□ 1.22
PTPN4-207ENST00000460162 RPL26P61254 145 aaKnown RBP22.69■■□□□ 1.22
PTPN4-207ENST00000460162 GBE1Q04446 702 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 CLPPQ16740 277 aaPredicted RBP22.69■■□□□ 1.22
PTPN4-207ENST00000460162 PCSK4Q6UW60 755 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 SLITRK4Q8IW52 837 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 PQLC3Q8N755 202 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 PTCD2Q8WV60 388 aaKnown RBP22.69■■□□□ 1.22
PTPN4-207ENST00000460162 WBP1Q96G27 269 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 SCARF2Q96GP6 870 aaPredicted RBP22.69■■□□□ 1.22
PTPN4-207ENST00000460162 ZNF830Q96NB3 372 aaPredicted RBP22.69■■□□□ 1.22
PTPN4-207ENST00000460162 OR2M4Q96R27 311 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 ABCG8Q9H221 673 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 DEF6Q9H4E7 631 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 CD84Q9UIB8 345 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 RPL26L1Q9UNX3 145 aaKnown RBP22.69■■□□□ 1.22
PTPN4-207ENST00000460162 CFAP46Q8IYW2 2715 aa22.69■■□□□ 1.22
PTPN4-207ENST00000460162 K7ENP7 123 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 CPNE6O95741 557 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 FGF1P05230 155 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 TMEM253P0C7T8 217 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 HGFP14210 728 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 AK4P27144 223 aaPredicted RBP22.68■■□□□ 1.22
PTPN4-207ENST00000460162 SLC5A2P31639 672 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 ADCY8P40145 1251 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 STC1P52823 247 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 B4GALNT1Q00973 533 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 CTBSQ01459 385 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 IHHQ14623 411 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 ASTE1Q2TB18 679 aaPredicted RBP22.68■■□□□ 1.22
PTPN4-207ENST00000460162 INO80CQ6PI98 192 aaPredicted RBP22.68■■□□□ 1.22
PTPN4-207ENST00000460162 DOK6Q6PKX4 331 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 SLC30A9Q6PML9 568 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 JAMLQ86YT9 394 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 ARRDC2Q8TBH0 407 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 LYSMD1Q96S90 227 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 PISDQ9UG56 409 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 AHCTF1Q8WYP5 2266 aa22.68■■□□□ 1.22
PTPN4-207ENST00000460162 A0A0U1RQS6 177 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 RHPN2P1A8MT19 583 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 ZNF487B1APH4 448 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 CBFA2T2O43439 604 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 POLD2P49005 469 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 PTSQ03393 145 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 TAF1BQ53T94 588 aaPredicted RBP22.67■■□□□ 1.22
PTPN4-207ENST00000460162 ZFYVE27Q5T4F4 411 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 RFLNAQ6ZTI6 216 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 CCDC13Q8IYE1 715 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 NRSN1Q8IZ57 195 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.67■■□□□ 1.22
PTPN4-207ENST00000460162 OR8K1Q8NGG5 319 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 SCAMP4Q969E2 229 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 SMIM14Q96QK8 99 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 CMKLR1Q99788 373 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 PCDH9Q9HC56 1237 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 DTLQ9NZJ0 730 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 CHKBQ9Y259 395 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 ST14Q9Y5Y6 855 aa22.67■■□□□ 1.22
PTPN4-207ENST00000460162 NVLO15381 856 aaKnown RBP22.66■■□□□ 1.22
PTPN4-207ENST00000460162 ECEL1O95672 775 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 GPR3P46089 330 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 BIRC2Q13490 618 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 LRP8Q14114 963 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 CCDC81Q6ZN84 652 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 TMPRSS9Q7Z410 1059 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 VSIG1Q86XK7 387 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 NAGSQ8N159 534 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 LPCAT1Q8NF37 534 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 RNF157Q96PX1 679 aa22.66■■□□□ 1.22
PTPN4-207ENST00000460162 ZNHIT6Q9NWK9 470 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms