RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 EIF2B3Q9NR50 452 aaKnown RBP10.83□□□□□ -0.68
CCDC12-204ENST00000460035 GPR27Q9NS67 375 aa10.83□□□□□ -0.68
CCDC12-204ENST00000460035 RAD18Q9NS91 495 aa10.83□□□□□ -0.68
CCDC12-204ENST00000460035 RXFP3Q9NSD7 469 aa10.83□□□□□ -0.68
CCDC12-204ENST00000460035 NFKBIL1Q9UBC1 381 aaPredicted RBP10.83□□□□□ -0.68
CCDC12-204ENST00000460035 ASIC3Q9UHC3 531 aa10.83□□□□□ -0.68
CCDC12-204ENST00000460035 CDC23Q9UJX2 597 aa10.83□□□□□ -0.68
CCDC12-204ENST00000460035 NEU2Q9Y3R4 380 aa10.83□□□□□ -0.68
CCDC12-204ENST00000460035 OR1A2Q9Y585 309 aa10.83□□□□□ -0.68
CCDC12-204ENST00000460035 C4orf47A7E2U8 309 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 K7ESM1 405 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 CACNB4O00305 520 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 STX7O15400 261 aaKnown RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 GDF9O60383 454 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 CER1O95813 267 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 TSHRP16473 764 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 BPIP17213 487 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 LPOP22079 712 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 HTR1BP28222 390 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 TEAD1P28347 426 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 HMGCLP35914 325 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 GRIA1P42261 906 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 PTGIRP43119 386 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 CTSKP43235 329 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 MAGEA6P43360 314 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 PFN3P60673 137 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 YPEL5P62699 121 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 SARNPP82979 210 aaKnown RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 CKAP4Q07065 602 aaKnown RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 DPTQ07507 201 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 C2orf54Q08AI8 447 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 CDH17Q12864 832 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 MSLNQ13421 630 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 SEPT6Q14141 434 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 PTK2BQ14289 1009 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 PTPRCAPQ14761 206 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 POU6F1Q14863 301 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 TAF1AQ15573 450 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 ZNF542PQ5EBM4 170 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 ESRP1Q6NXG1 681 aaKnown RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 ENPP7Q6UWV6 458 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 ZNF572Q7Z3I7 529 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 NLRP8Q86W28 1048 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 PELI3Q8N2H9 469 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 TTC30BQ8N4P2 665 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 MINDY1Q8N5J2 469 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 GPR26Q8NDV2 337 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 SPATA4Q8NEY3 305 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 AGAP2Q99490 1192 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 IL21RQ9HBE5 538 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 TMEM9BQ9NQ34 198 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 PHPT1Q9NRX4 125 aaPredicted RBP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC12-204ENST00000460035 MOSPD1Q9UJG1 213 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 PKP3Q9Y446 797 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 KCTD3Q9Y597 815 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 ARL5AQ9Y689 179 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 RP1P56715 2156 aa10.82□□□□□ -0.68
CCDC12-204ENST00000460035 ASXL3Q9C0F0 2248 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 TCRBV7S3A2A0A539 114 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 INPP4BO15327 924 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 TTI1O43156 1089 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 PYGLP06737 847 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 TPSB2P20231 275 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 ARRB1P49407 418 aaPredicted RBP10.81□□□□□ -0.68
CCDC12-204ENST00000460035 SESN2P58004 480 aaPredicted RBP10.81□□□□□ -0.68
CCDC12-204ENST00000460035 DCDC1P59894 354 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 MRPS25P82663 173 aaKnown RBP10.81□□□□□ -0.68
CCDC12-204ENST00000460035 TMPRSS15P98073 1019 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 CDK16Q00536 496 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 PDE1BQ01064 536 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 PTK6Q13882 451 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 FZD2Q14332 565 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 TPSAB1Q15661 275 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 WHAMMP3Q1A5X7 153 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 TPRG1LQ5T0D9 272 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 CERCAMQ5T4B2 595 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 STPG1Q5TH74 334 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 SYDE1Q6ZW31 735 aaPredicted RBP10.81□□□□□ -0.68
CCDC12-204ENST00000460035 RD3Q7Z3Z2 195 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 JAMLQ86YT9 394 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 SLC22A18ASQ8N1D0 253 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 FUBP1Q96AE4 644 aaKnown RBP10.81□□□□□ -0.68
CCDC12-204ENST00000460035 ELF4Q99607 663 aaPredicted RBP10.81□□□□□ -0.68
CCDC12-204ENST00000460035 C19orf43Q9BQ61 176 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 CDH19Q9H159 772 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 WDR26Q9H7D7 661 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 ERVMER34-1Q9H9K5 563 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 CASS4Q9NQ75 786 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 DNAJC28Q9NX36 388 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 IL17CQ9P0M4 197 aa10.81□□□□□ -0.68
CCDC12-204ENST00000460035 COL5A1P20908 1838 aaPredicted RBP10.81□□□□□ -0.68
CCDC12-204ENST00000460035 KNTC1P50748 2209 aa10.8□□□□□ -0.68
CCDC12-204ENST00000460035 SPTY2D1-AS1A0A0U1RR47 76 aa10.8□□□□□ -0.68
CCDC12-204ENST00000460035 CCDC78A2IDD5 438 aa10.8□□□□□ -0.68
CCDC12-204ENST00000460035 GOLGA8MH3BSY2 632 aa10.8□□□□□ -0.68
CCDC12-204ENST00000460035 AP3B1O00203 1094 aa10.8□□□□□ -0.68
CCDC12-204ENST00000460035 CDX4O14627 284 aaPredicted RBP10.8□□□□□ -0.68
CCDC12-204ENST00000460035 DFNA5O60443 496 aa10.8□□□□□ -0.68
CCDC12-204ENST00000460035 PPFIA2O75334 1257 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms