RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 C16orf97H3BN30 126 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 TGFB1I1O43294 461 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 EGFP01133 1207 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 UBL4AP11441 157 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 DDX5P17844 614 aaKnown RBP3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 MCM3P25205 808 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 ICAM3P32942 547 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 RAD23BP54727 409 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 SYT16Q17RD7 645 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 TSSK4Q6SA08 328 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 PQLC2Q6ZP29 291 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 C1orf87Q8N0U7 546 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 LMNTD1Q8N9Z9 388 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 IL17RCQ8NAC3 791 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 KCNH5Q8NCM2 988 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 PPM1EQ8WY54 764 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 RHBDF1Q96CC6 855 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 PPP1R13BQ96KQ4 1090 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 PIP5K1AQ99755 562 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 SH3GL2Q99962 352 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 IFIH1Q9BYX4 1025 aaKnown RBP3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 SLC28A3Q9HAS3 691 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 PREBQ9HCU5 417 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 UBN1Q9NPG3 1134 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 ASAH2Q9NR71 780 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 TMEM30AQ9NV96 361 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 KDM3AQ9Y4C1 1321 aa3.58□□□□□ -1.84
SNORD42A-201ENST00000459584 ASPDHA6ND91 283 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 EIF3CLB5ME19 914 aaKnown RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 NPHP1O15259 732 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 KRT86O43790 486 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 NKX2-2O95096 273 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 RRM1P23921 792 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 GNL1P36915 607 aaPredicted RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 IL15P40933 162 aaPredicted RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 CASP6P55212 293 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 EIF3BP55884 814 aaKnown RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 KRT81Q14533 505 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 KRT24Q2M2I5 525 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 USP41Q3LFD5 358 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 C6orf141Q5SZD1 244 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 STXBP5Q5T5C0 1151 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 SIGIRRQ6IA17 410 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 CDC73Q6P1J9 531 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 R3HCC1LQ7Z5L2 792 aaKnown RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 RNF113BQ8IZP6 322 aaKnown RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 BEST3Q8N1M1 668 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 PCDH20Q8N6Y1 951 aaKnown RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 OR14L1PQ8NHC6 308 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 METTL6Q8TCB7 284 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 MAGEC3Q8TD91 643 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 LRRC8CQ8TDW0 803 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 IGSF8Q969P0 613 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 CDCA5Q96FF9 252 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 TMEM47Q9BQJ4 181 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 PRKRIP1Q9H875 184 aaPredicted RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 ZFP57Q9NU63 452 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 ACSS1Q9NUB1 689 aaPredicted RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 CNOT8Q9UFF9 292 aaKnown RBP3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 GTF2A1LQ9UNN4 478 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 AMDHD2Q9Y303 409 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 OR2W1Q9Y3N9 320 aa3.57□□□□□ -1.84
SNORD42A-201ENST00000459584 GOLGA6L9A6NEM1 432 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 PRR23AA6NEV1 266 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 NPIPB15A6NHN6 443 aaPredicted RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 SOCS5O75159 536 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 GAS8-AS1O95177 125 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 ATP1A1P05023 1023 aaKnown RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 SP1P08047 785 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 HOXB5P09067 269 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 CETPP11597 493 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 KRT10P13645 584 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 TCEA1P23193 301 aaKnown RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 MARK3P27448 753 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 RGS2P41220 211 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 CSNK2A1P68400 391 aaPredicted RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 FOXM1Q08050 763 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 TMEM115Q12893 351 aaPredicted RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 DCTN2Q13561 401 aaKnown RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 FRG1Q14331 258 aaKnown RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 CXorf66Q5JRM2 361 aaPredicted RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 GORABQ5T7V8 394 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 INO80CQ6PI98 192 aaPredicted RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 ATF7IPQ6VMQ6 1270 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 RAD9BQ6WBX8 426 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 TMPRSS12Q86WS5 348 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 KMT5CQ86Y97 462 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 DCUN1D3Q8IWE4 304 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 TSPYL6Q8N831 410 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 ZBTB8BQ8NAP8 495 aaPredicted RBP3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 ACVR1CQ8NER5 493 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 CSNK2A3Q8NEV1 391 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 OR5R1Q8NH85 324 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 APBB2Q92870 758 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 ACOX2Q99424 681 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 PCGF1Q9BSM1 259 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 MMP28Q9H239 520 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 PLEKHA5Q9HAU0 1116 aa3.56□□□□□ -1.84
SNORD42A-201ENST00000459584 KLHL1Q9NR64 748 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms