RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 SLC45A3Q96JT2 553 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 CFAP57Q96MR6 1250 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 NCAPGQ9BPX3 1015 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 ZPBPQ9BS86 351 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 WRAP53Q9BUR4 548 aaKnown RBP5.68□□□□□ -1.5
VPS8-214ENST00000458721 GSDMCQ9BYG8 508 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 EPN3Q9H201 632 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 PDCL3Q9H2J4 239 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 TRIT1Q9H3H1 467 aaKnown RBP5.68□□□□□ -1.5
VPS8-214ENST00000458721 WDR26Q9H7D7 661 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 ATP13A3Q9H7F0 1226 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 ZFP64Q9NPA5 681 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 MBNL1Q9NR56 388 aaKnown RBP5.68□□□□□ -1.5
VPS8-214ENST00000458721 TRNAU1APQ9NX07 287 aaKnown RBP5.68□□□□□ -1.5
VPS8-214ENST00000458721 FOXJ2Q9P0K8 574 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 SIRPGQ9P1W8 387 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 LRIT1Q9P2V4 623 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 ATP8A1Q9Y2Q0 1164 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 NOTCH2Q04721 2471 aa5.68□□□□□ -1.5
VPS8-214ENST00000458721 ZNF106Q9H2Y7 1883 aaKnown RBP5.67□□□□□ -1.5
VPS8-214ENST00000458721 PRSS38A1L453 326 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 B4DGG1 531 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 PYCARD-AS1I3L0S3 204 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 LINC01387J3KSC0 135 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 PSMD11O00231 422 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 BUB1O43683 1085 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 PYGLP06737 847 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 ELFN1P0C7U0 828 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 THRAP10827 490 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 CCNB1P14635 433 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 SLC9A1P19634 815 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 MMP8P22894 467 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 ERCC5P28715 1186 aaPredicted RBP5.67□□□□□ -1.5
VPS8-214ENST00000458721 CSTF2P33240 577 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS8-214ENST00000458721 ACVRL1P37023 503 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 ETV5P41161 510 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 FASLGP48023 281 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 CD97P48960 835 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 LIG3P49916 1009 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 LIMK2P53671 638 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 MAPK10P53779 464 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 B4GALNT1Q00973 533 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 SEPT6Q14141 434 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 MAP7Q14244 749 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 CLCA4Q14CN2 919 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 C16orf72Q14CZ0 275 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 MAN2A1Q16706 1144 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 ATXN7L2Q5T6C5 722 aaPredicted RBP5.67□□□□□ -1.5
VPS8-214ENST00000458721 TMCO4Q5TGY1 634 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 RWDD4Q6NW29 188 aaKnown RBP5.67□□□□□ -1.5
VPS8-214ENST00000458721 ENPP7Q6UWV6 458 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 TRIM72Q6ZMU5 477 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 VASH2Q86V25 355 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 ATCAYQ86WG3 371 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 ZFAND4Q86XD8 727 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 AVL9Q8NBF6 648 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 FAM46DQ8NEK8 389 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 CENPIQ92674 756 aaPredicted RBP5.67□□□□□ -1.5
VPS8-214ENST00000458721 NKD1Q969G9 470 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 TSACCQ96A04 125 aaPredicted RBP5.67□□□□□ -1.5
VPS8-214ENST00000458721 ECHDC3Q96DC8 303 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 CRACR2AQ9BSW2 395 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 LACRTQ9GZZ8 138 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 RASSF4Q9H2L5 321 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 DPEP2Q9H4A9 486 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 EPB41L1Q9H4G0 881 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 CATSPERBQ9H7T0 1116 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 CAAP1Q9H8G2 361 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 FGF22Q9HCT0 170 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 SIX2Q9NPC8 291 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 PCDH12Q9NPG4 1184 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 PDP2Q9P2J9 529 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 DNAI1Q9UI46 699 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 DNAJC12Q9UKB3 198 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 OR1A2Q9Y585 309 aa5.67□□□□□ -1.5
VPS8-214ENST00000458721 DOPEY1Q5JWR5 2465 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 RP1L1Q8IWN7 2480 aaPredicted RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 IGHV5-10-1A0A0J9YXX1 117 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 ANKRD62A6NC57 917 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 C2CD4BA6NLJ0 364 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 RHPN2P1A8MT19 583 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 F8VZ95 297 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 FOXN3O00409 490 aaPredicted RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 DUX1O43812 170 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 SOCS5O75159 536 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 RECQL5O94762 991 aaPredicted RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 ALX3O95076 343 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 PCCBP05166 539 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 PLEKP08567 350 aaPredicted RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 WT1P19544 449 aaPredicted RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 MAP4P27816 1152 aaKnown RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 EPHB2P29323 1055 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 GKP32189 559 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 UGT1A3P35503 534 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 HSPA9P38646 679 aaKnown RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 NOP2P46087 812 aaKnown RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 MTIF2P46199 727 aaKnown RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 ZNF135P52742 658 aaPredicted RBP5.66□□□□□ -1.5
VPS8-214ENST00000458721 NDST2P52849 883 aa5.66□□□□□ -1.5
VPS8-214ENST00000458721 COPB1P53618 953 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms