RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ADAMTS14Q8WXS8 1223 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 TSACCQ96A04 125 aaPredicted RBP16.1■□□□□ 0.17
CD28-203ENST00000458610 OXNAD1Q96HP4 312 aaPredicted RBP16.1■□□□□ 0.17
CD28-203ENST00000458610 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 MRGPRX2Q96LB1 330 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 SMIM14Q96QK8 99 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 RIOK2Q9BVS4 552 aaKnown RBP16.1■□□□□ 0.17
CD28-203ENST00000458610 HOMER3Q9NSC5 361 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.1■□□□□ 0.17
CD28-203ENST00000458610 FEZ2Q9UHY8 353 aaPredicted RBP16.1■□□□□ 0.17
CD28-203ENST00000458610 CD84Q9UIB8 345 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 KLF15Q9UIH9 416 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 MOSPD1Q9UJG1 213 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 ANGPTL2Q9UKU9 493 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 ZKSCAN5Q9Y2L8 839 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 ZNF711Q9Y462 761 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 LMO7DNF2Z398 122 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 K7ESM1 405 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 KIF5CO60282 957 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 ATXN1LP0C7T5 689 aaKnown RBP16.09■□□□□ 0.17
CD28-203ENST00000458610 SLC1A5Q15758 541 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 PROX2Q3B8N5 592 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 SIRPB2Q5JXA9 342 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 SLC25A41Q8N5S1 370 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 CCDC110Q8TBZ0 833 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 SCAMP4Q969E2 229 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 HIC2Q96JB3 615 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 TLR10Q9BXR5 811 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 SHOC2Q9UQ13 582 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 ZNF148Q9UQR1 794 aa16.09■□□□□ 0.17
CD28-203ENST00000458610 TMEM131Q92545 1883 aa16.08■□□□□ 0.17
CD28-203ENST00000458610 A0A0U1RQS6 177 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 TCRBV7S2A1N4TA0A589 114 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 TMEM202A6NGA9 273 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 TRIM38O00635 465 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 LIASO43766 372 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 CEP104O60308 925 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 PPFIA2O75334 1257 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 HMGCLP35914 325 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 DCDC1P59894 354 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 SHC2P98077 582 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 E2F1Q01094 437 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 CCNG2Q16589 344 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 FAM182AQ5T1J6 154 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 PDPK2PQ6A1A2 396 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 SLCO6A1Q86UG4 719 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 RBFAQ8N0V3 343 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 TMEM121Q9BTD3 319 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 ZSCAN5AQ9BUG6 496 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 LRRC61Q9BV99 259 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 LGR4Q9BXB1 951 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 CYP4F12Q9HCS2 524 aa16.08■□□□□ 0.16
CD28-203ENST00000458610 NFKBIL1Q9UBC1 381 aaPredicted RBP16.08■□□□□ 0.16
CD28-203ENST00000458610 R3HDM2Q9Y2K5 976 aaKnown RBP16.08■□□□□ 0.16
CD28-203ENST00000458610 PRSS38A1L453 326 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 C2orf81A6NN90 581 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 F5H423 210 aaPredicted RBP16.07■□□□□ 0.16
CD28-203ENST00000458610 YY2O15391 372 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 RFPL3O75679 317 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 AGTP01019 485 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 FGGP02679 453 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 PIRTP0C851 137 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 CKMT1AP12532 417 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 ACP1P24666 158 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 PSMB4P28070 264 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 PDE1BQ01064 536 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 C1orf61Q13536 156 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 LONRF2Q1L5Z9 754 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 DEFB133Q30KQ1 61 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 ZNF569Q5MCW4 686 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 RANBP10Q6VN20 620 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 RFLNAQ6ZTI6 216 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 RAB44Q7Z6P3 723 aaPredicted RBP16.07■□□□□ 0.16
CD28-203ENST00000458610 REXO1L1PQ8IX06 675 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 GALNT15Q8N3T1 639 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 TRAM1L1Q8N609 369 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 DTX3LQ8TDB6 740 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 OR1E3Q8WZA6 343 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 PBKQ96KB5 322 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 APOLD1Q96LR9 279 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 NAP1L3Q99457 506 aaPredicted RBP16.07■□□□□ 0.16
CD28-203ENST00000458610 FICDQ9BVA6 458 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 SPATA16Q9BXB7 569 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 FGF22Q9HCT0 170 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 TRNAU1APQ9NX07 287 aaKnown RBP16.07■□□□□ 0.16
CD28-203ENST00000458610 DRG1Q9Y295 367 aaKnown RBP16.07■□□□□ 0.16
CD28-203ENST00000458610 SLC17A4Q9Y2C5 497 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 PKP3Q9Y446 797 aa16.07■□□□□ 0.16
CD28-203ENST00000458610 ERI2A8K979 691 aaKnown RBP16.06■□□□□ 0.16
CD28-203ENST00000458610 DKK1O94907 266 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 ASMTLO95671 621 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 CEACAM5P06731 702 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 IVLP07476 585 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 GIMD1P0DJR0 217 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 ILF3Q12906 894 aaKnown RBP eCLIP16.06■□□□□ 0.16
CD28-203ENST00000458610 CCDC157Q569K6 752 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 C6orf132Q5T0Z8 1188 aa16.06■□□□□ 0.16
CD28-203ENST00000458610 HENMT1Q5T8I9 393 aaKnown RBP16.06■□□□□ 0.16
CD28-203ENST00000458610 DRICH1Q6PGQ1 229 aaPredicted RBP16.06■□□□□ 0.16
CD28-203ENST00000458610 C4orf22Q6V702 233 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms