RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 DMTF1Q9Y222 760 aa14.09□□□□□ -0.15
LINC00887-204ENST00000456816 SLC30A1Q9Y6M5 507 aa14.09□□□□□ -0.15
LINC00887-204ENST00000456816 CACNA1IQ9P0X4 2223 aa14.09□□□□□ -0.15
LINC00887-204ENST00000456816 E7ESA3 106 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 FPGTO14772 594 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 LATO43561 262 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 PRAMEF1O95521 474 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 TTC4O95801 387 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ITGALP20701 1170 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 CD27P26842 260 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 TNFRSF8P28908 595 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ECHS1P30084 290 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 MAGEA4P43358 317 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 GPR1P46091 355 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 DCDC1P59894 354 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 VSNL1P62760 191 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 NAA30Q147X3 362 aaPredicted RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 FASTKD3Q14CZ7 662 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 WSCD2Q2TBF2 565 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ANKRD20A4Q4UJ75 823 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ZRANB3Q5FWF4 1079 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 PMS2CLQ68D20 193 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ESRP1Q6NXG1 681 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 AFTPHQ6ULP2 937 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ZNF765Q7L2R6 523 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 RAVER1Q8IY67 606 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 AGGF1Q8N302 714 aaeCLIP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 EIF1ADQ8N9N8 165 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ZBTB44Q8NCP5 570 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ASB12Q8WXK4 309 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 NELL1Q92832 810 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 SCAMP4Q969E2 229 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 HDAC10Q969S8 669 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 MFSD3Q96ES6 412 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 C9orf72Q96LT7 481 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ZNF778Q96MU6 729 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 PLEKHG4BQ96PX9 1271 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 TRIM56Q9BRZ2 755 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 PARD6BQ9BYG5 372 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 DUSP15Q9H1R2 295 aaPredicted RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 ABCG8Q9H221 673 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 VPS37BQ9H9H4 285 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 PPANQ9NQ55 473 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 EIF2B4Q9UI10 523 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 APPL1Q9UKG1 709 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 RIMKLBQ9ULI2 386 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.08□□□□□ -0.16
LINC00887-204ENST00000456816 R4GN57 208 aa14.08□□□□□ -0.16
LINC00887-204ENST00000456816 A0A1W2PPC4 97 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 PRAMEF26H0Y7S4 382 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 RAD51BO15315 384 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 USP1O94782 785 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 VAPBO95292 243 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 TUBBP07437 444 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 GM2AP17900 193 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 MAOBP27338 520 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 MC4RP32245 332 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 PTGER3P43115 390 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 PTPN5P54829 565 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 THOC5Q13769 683 aaKnown RBP14.07□□□□□ -0.16
LINC00887-204ENST00000456816 STAT4Q14765 748 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CRYMQ14894 314 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 SLMAPQ14BN4 828 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CHRNA6Q15825 494 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 LPAL2Q16609 132 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 PLK5Q496M5 336 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 SPANXN3Q5MJ09 141 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 WDR93Q6P2C0 686 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CCNI2Q6ZMN8 369 aaPredicted RBP14.07□□□□□ -0.16
LINC00887-204ENST00000456816 TAS2R42Q7RTR8 314 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 PTAR1Q7Z6K3 402 aaPredicted RBP14.07□□□□□ -0.16
LINC00887-204ENST00000456816 SLC41A1Q8IVJ1 513 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 IGDCC3Q8IVU1 814 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CBARPQ8N350 705 aaPredicted RBP14.07□□□□□ -0.16
LINC00887-204ENST00000456816 TP53I13Q8NBR0 393 aaPredicted RBP14.07□□□□□ -0.16
LINC00887-204ENST00000456816 DENND6BQ8NEG7 585 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 OR13J1Q8NGT2 312 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 GDAP1Q8TB36 358 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 PEX13Q92968 403 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CDKN2AIPNLQ96HQ2 116 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 TBATAQ96M53 351 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 ZSCAN5AQ9BUG6 496 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 SUDS3Q9H7L9 328 aaPredicted RBP14.07□□□□□ -0.16
LINC00887-204ENST00000456816 IL26Q9NPH9 171 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 C20orf96Q9NUD7 363 aaPredicted RBP14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CRLS1Q9UJA2 301 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CA5BQ9Y2D0 317 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 TEX264Q9Y6I9 313 aa14.07□□□□□ -0.16
LINC00887-204ENST00000456816 CCDC162PA2VCL2 907 aa14.06□□□□□ -0.16
LINC00887-204ENST00000456816 OR51F1A6NGY5 319 aa14.06□□□□□ -0.16
LINC00887-204ENST00000456816 INPP4BO15327 924 aa14.06□□□□□ -0.16
LINC00887-204ENST00000456816 SRP72O76094 671 aaKnown RBP14.06□□□□□ -0.16
LINC00887-204ENST00000456816 GOT2P00505 430 aaKnown RBP14.06□□□□□ -0.16
LINC00887-204ENST00000456816 PYGLP06737 847 aa14.06□□□□□ -0.16
LINC00887-204ENST00000456816 FAM153BP0C7A2 387 aa14.06□□□□□ -0.16
LINC00887-204ENST00000456816 MYBL2P10244 700 aa14.06□□□□□ -0.16
LINC00887-204ENST00000456816 TSHRP16473 764 aa14.06□□□□□ -0.16
LINC00887-204ENST00000456816 IGFALSP35858 605 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms