RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 NFATC4Q14934 902 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 HENMT1Q5T8I9 393 aaKnown RBP27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 RAET1GQ6H3X3 334 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 SYT10Q6XYQ8 523 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 CAPZA3Q96KX2 299 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 RTKNQ9BST9 563 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 RIOK2Q9BVS4 552 aaKnown RBP27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 CDH19Q9H159 772 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 FAM83DQ9H4H8 585 aa27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 NFKBIL1Q9UBC1 381 aaPredicted RBP27.89■■■□□ 2.06
SMARCC1-203ENST00000454240 MYLKQ15746 1914 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 SUN1O94901 812 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 CSF2P04141 144 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 GPR1P46091 355 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 FNTAP49354 379 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 IL9RQ01113 521 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 GLT6D1Q7Z4J2 308 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 GPR26Q8NDV2 337 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 TRIM44Q96DX7 344 aaPredicted RBP27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 AGAP2Q99490 1192 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 LGR4Q9BXB1 951 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 WDR26Q9H7D7 661 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 RAD18Q9NS91 495 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 RNF14Q9UBS8 474 aa27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 PNMA8BQ9ULN7 279 aaPredicted RBP27.88■■■□□ 2.05
SMARCC1-203ENST00000454240 CACNB4O00305 520 aaPredicted RBP27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 SLC4A1P02730 911 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 PYGLP06737 847 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 BPIP17213 487 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 HTR1BP28222 390 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 EPHA8P29322 1005 aaPredicted RBP27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 DCDC1P59894 354 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 BNIP3Q12983 259 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 ADAMTSL4Q6UY14 1074 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 LINC00523Q86TU6 105 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 HEATR4Q86WZ0 1026 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 BRSK1Q8TDC3 778 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 SAP25Q8TEE9 199 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 DNAJC28Q9NX36 388 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 IL17CQ9P0M4 197 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 KLF15Q9UIH9 416 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 NEU2Q9Y3R4 380 aa27.87■■■□□ 2.05
SMARCC1-203ENST00000454240 E7EVH7 732 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 NME1P15531 152 aaKnown RBP27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 CDK3Q00526 305 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 SUZ12Q15022 739 aaKnown RBP27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 TAF1AQ15573 450 aaPredicted RBP27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 ZNF542PQ5EBM4 170 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 ENPP7Q6UWV6 458 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 KANSL1Q7Z3B3 1105 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 PIP4P1Q86T03 277 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 WDR92Q96MX6 357 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 CAAP1Q9H8G2 361 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 PHPT1Q9NRX4 125 aaPredicted RBP27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 ZNF106Q9H2Y7 1883 aaKnown RBP27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 DCHS1Q96JQ0 3298 aa27.86■■■□□ 2.05
SMARCC1-203ENST00000454240 TMEM202A6NGA9 273 aa27.85■■■□□ 2.05
SMARCC1-203ENST00000454240 PDE2AO00408 941 aaPredicted RBP27.85■■■□□ 2.05
SMARCC1-203ENST00000454240 KRT14P02533 472 aa27.85■■■□□ 2.05
SMARCC1-203ENST00000454240 MYCLP1P12525 358 aaPredicted RBP27.85■■■□□ 2.05
SMARCC1-203ENST00000454240 KCTD19Q17RG1 926 aaPredicted RBP27.85■■■□□ 2.05
SMARCC1-203ENST00000454240 BPIFA1Q9NP55 256 aa27.85■■■□□ 2.05
SMARCC1-203ENST00000454240 EIF2B3Q9NR50 452 aaKnown RBP27.85■■■□□ 2.05
SMARCC1-203ENST00000454240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 APRTP07741 180 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 KELP23276 732 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 PAFAH1B1P43034 410 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 LMAN1P49257 510 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 HNRNPKP61978 463 aaKnown RBP eCLIP27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 TRIP13Q15645 432 aaPredicted RBP27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 GATAD2AQ86YP4 633 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 GRK7Q8WTQ7 553 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 PLEKHG4BQ96PX9 1271 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 DDX47Q9H0S4 455 aaKnown RBP27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 CNOT6Q9ULM6 557 aaKnown RBP27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 ARL5AQ9Y689 179 aa27.84■■■□□ 2.05
SMARCC1-203ENST00000454240 C2orf81A6NN90 581 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 FADS2P1A8MWK0 482 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 TNFRSF10CO14798 259 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 PPFIA2O75334 1257 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 PIAS2O75928 621 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 JUNDP17535 347 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 LPOP22079 712 aaPredicted RBP27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 DGKAP23743 735 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 PPARDQ03181 441 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 PUM1Q14671 1186 aaKnown RBP eCLIP27.83■■■□□ 2.052e-13■■□□□ 14.5
SMARCC1-203ENST00000454240 ALG11Q2TAA5 492 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 ALS2CLQ60I27 953 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 OR56A4Q8NGH8 313 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 OR52K1Q8NGK4 314 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 COX14Q96I36 57 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 C16orf45Q96MC5 204 aaPredicted RBP27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.83■■■□□ 2.052e-6■■□□□ 11.5
SMARCC1-203ENST00000454240 PCYOX1Q9UHG3 505 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 PKP3Q9Y446 797 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 PCNX2A6NKB5 2137 aa27.83■■■□□ 2.05
SMARCC1-203ENST00000454240 ARID1BQ8NFD5 2236 aaPredicted RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 FLRT2O43155 660 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 BUD23O43709 281 aaKnown RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 SH3BP5O60239 455 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms