RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KRBA1A5PL33 1030 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 OTOL1A6NHN0 477 aaPredicted RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 SPECC1L-ADORA2AF8WAN1 911 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 CCL22O00626 93 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 WISP3O95389 354 aaPredicted RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 CHRNGP07510 517 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 ARSAP15289 507 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 MPSTP25325 297 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 IL31Q6EBC2 164 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 PTAR1Q7Z6K3 402 aaPredicted RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 TMPRSS6Q8IU80 811 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 LMNTD2Q8IXW0 634 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 HEXDCQ8WVB3 486 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 PEX13Q92968 403 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 NSMCE3Q96MG7 304 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 PSKH2Q96QS6 385 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 MRPL57Q9BQC6 102 aaKnown RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 MRPL46Q9H2W6 279 aaKnown RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 COG4Q9H9E3 785 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 EBF2Q9HAK2 575 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 HEBP1Q9NRV9 189 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 THG1LQ9NWX6 298 aaKnown RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 UBA2Q9UBT2 640 aaPredicted RBP10.72□□□□□ -0.69
PKP4-206ENST00000452162 FBXL21Q9UKT6 434 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 PLA2G4CQ9UP65 541 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 RAP2CQ9Y3L5 183 aa10.72□□□□□ -0.69
PKP4-206ENST00000452162 ILVBLA1L0T0 632 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 FAM86C2PA6NEL3 165 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 GREM1O60565 184 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 DIAPH2O60879 1101 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 S1PR4O95977 384 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 PDGFBP01127 241 aaPredicted RBP10.71□□□□□ -0.69
PKP4-206ENST00000452162 SERPINF2P08697 491 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 GLDCP23378 1020 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 CCR10P46092 362 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 RGRP47804 291 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 KPNA2P52292 529 aaKnown RBP10.71□□□□□ -0.69
PKP4-206ENST00000452162 SLC12A2P55011 1212 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 OXCT1P55809 520 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 KDSRQ06136 332 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 GALNT3Q14435 633 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 HECTD2Q5U5R9 776 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 LSMEM2Q8N112 164 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 SIX5Q8N196 739 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 SPATA6LQ8N4H0 392 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 PNPLA1Q8N8W4 532 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 MAPK15Q8TD08 544 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 OSCP1Q8WVF1 389 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 MOCOSQ96EN8 888 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 ILKAPQ9H0C8 392 aaPredicted RBP10.71□□□□□ -0.69
PKP4-206ENST00000452162 RNPEPL1Q9HAU8 725 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 C11orf16Q9NQ32 467 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 HPS4Q9NQG7 708 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 DUS2Q9NX74 493 aaKnown RBP10.71□□□□□ -0.69
PKP4-206ENST00000452162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.71□□□□□ -0.694e-8■■■□□ 17.2
PKP4-206ENST00000452162 WNT16Q9UBV4 365 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 NKX1-2Q9UD57 310 aaPredicted RBP10.71□□□□□ -0.69
PKP4-206ENST00000452162 AGO1Q9UL18 857 aaKnown RBP10.71□□□□□ -0.69
PKP4-206ENST00000452162 RIMKLBQ9ULI2 386 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 ARL5AQ9Y689 179 aa10.71□□□□□ -0.69
PKP4-206ENST00000452162 WDFY4Q6ZS81 3184 aa10.71□□□□□ -0.7
PKP4-206ENST00000452162 OR51F1A6NGY5 319 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 MATN2O00339 956 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 MAGEC1O60732 1142 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 NDST3O95803 873 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 CR2P20023 1033 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 SOX9P48436 509 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 HK2P52789 917 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 NAGLUP54802 743 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 PRAMEP78395 509 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 PFKPQ01813 784 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 LAMB3Q13751 1172 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 RFTN1Q14699 578 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 EML3Q32P44 896 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 SLC9B1Q4ZJI4 515 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 SLC44A4Q53GD3 710 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 ARL13AQ5H913 290 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 TECRLQ5HYJ1 363 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 ADGRF1Q5T601 910 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 SETD3Q86TU7 594 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 SPNS2Q8IVW8 549 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 BBS5Q8N3I7 341 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 ENDOVQ8N8Q3 282 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 TXNDC5Q8NBS9 432 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 GPR150Q8NGU9 434 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 OR6P1Q8NGX9 317 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 STON2Q8WXE9 905 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 DNASE1L2Q92874 299 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 MCUR1Q96AQ8 359 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 TSPAN17Q96FV3 270 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 DNAJC1Q96KC8 554 aaKnown RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 SPON2Q9BUD6 331 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 CINPQ9BW66 212 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 ACSS2Q9NR19 701 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 TBC1D30Q9Y2I9 924 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 SH3BP1Q9Y3L3 701 aa10.7□□□□□ -0.7
PKP4-206ENST00000452162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.7□□□□□ -0.7
PKP4-206ENST00000452162 A0A1B0GVM2 712 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms